Information for 4-CTTTGAAAYAACTGTT (Motif 18)

A T G C G C A T A C G T C G A T C T A G G C T A C G T A C G T A G A C T C G T A C G T A G A T C G C A T C A T G G A C T C G A T
Reverse Opposite:
C G T A C G T A G T A C C G T A C A T G A C G T A C G T C T G A C G A T A C G T C A G T G A T C G C T A C G T A C G T A A T C G
p-value:1e-10
log p-value:-2.386e+01
Information Content per bp:1.710
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.2 +/- 19.3bp
Average Position of motif in Background76.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTTTGAAAYAACTGTT-
GTTAAAAAAAAAAATTA
 A T G C G C A T A C G T C G A T C T A G G C T A C G T A C G T A G A C T C G T A C G T A G A T C G C A T C A T G G A C T C G A T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0063.1_Sox13_1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTTTGAAAYAACTGTT-
-TTAAGAACAATAAATT
 A T G C G C A T A C G T C G A T C T A G G C T A C G T A C G T A G A C T C G T A C G T A G A T C G C A T C A T G G A C T C G A T A C G T
A C G T C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

MYF6/MA0667.1/Jaspar

Match Rank:3
Score:0.60
Offset:6
Orientation:forward strand
Alignment:CTTTGAAAYAACTGTT
------AACAGCTGTT
 A T G C G C A T A C G T C G A T C T A G G C T A C G T A C G T A G A C T C G T A C G T A G A T C G C A T C A T G G A C T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C T C G A T C A G A G T C C G A T A T C G G A C T A G C T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTTTGAAAYAACTGTT
TACTGGAAAAAAAA---
 A C G T A T G C G C A T A C G T C G A T C T A G G C T A C G T A C G T A G A C T C G T A C G T A G A T C G C A T C A T G G A C T C G A T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTTTGAAAYAACTGTT--
-TNNAGAACAATANATNN
 A T G C G C A T A C G T C G A T C T A G G C T A C G T A C G T A G A C T C G T A C G T A G A T C G C A T C A T G G A C T C G A T A C G T A C G T
A C G T G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0067.1_Sox18_1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTTTGAAAYAACTGTT
NNTNANAACAATTNNA
 A T G C G C A T A C G T C G A T C T A G G C T A C G T A C G T A G A C T C G T A C G T A G A T C G C A T C A T G G A C T C G A T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0062.1_Sox12_1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTTTGAAAYAACTGTT
NTTNAGAACAATTA--
 A T G C G C A T A C G T C G A T C T A G G C T A C G T A C G T A G A C T C G T A C G T A G A T C G C A T C A T G G A C T C G A T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTTTGAAAYAACTGTT--
-TNCNNAACAATTTTTNC
 A T G C G C A T A C G T C G A T C T A G G C T A C G T A C G T A G A C T C G T A C G T A G A T C G C A T C A T G G A C T C G A T A C G T A C G T
A C G T G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0116.1_Elf3_2/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTTTGAAAYAACTGTT-
GTTCAAAAAAAAAATTC
 A T G C G C A T A C G T C G A T C T A G G C T A C G T A C G T A G A C T C G T A C G T A G A T C G C A T C A T G G A C T C G A T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PB0072.1_Sox5_1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTTTGAAAYAACTGTT-
-TTTAGAACAATAAAAT
 A T G C G C A T A C G T C G A T C T A G G C T A C G T A C G T A G A C T C G T A C G T A G A T C G C A T C A T G G A C T C G A T A C G T
A C G T C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T