Information for 9-GGGSTTAMTG (Motif 13)

A C T G A C T G A C T G A T G C A C G T A G C T C G T A G T A C A C G T A C T G
Reverse Opposite:
A G T C G T C A A C T G A C G T C T G A C G T A A T C G A G T C A G T C A G T C
p-value:1e-10
log p-value:-2.444e+01
Information Content per bp:1.900
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets54.4 +/- 31.1bp
Average Position of motif in Background43.9 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGGSTTAMTG
NGGGATTA---
 A C G T A C T G A C T G A C T G A T G C A C G T A G C T C G T A G T A C A C G T A C T G
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GGGSTTAMTG
GGGATTANN-
 A C T G A C T G A C T G A T G C A C G T A G C T C G T A G T A C A C G T A C T G
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T

PH0130.1_Otx2/Jaspar

Match Rank:3
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GGGSTTAMTG---
TGTAGGGATTAATTGTC
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A T G C A C G T A G C T C G T A G T A C A C G T A C T G A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

PH0138.1_Pitx2/Jaspar

Match Rank:4
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GGGSTTAMTG---
TGAAGGGATTAATCATC
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A T G C A C G T A G C T C G T A G T A C A C G T A C T G A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PH0129.1_Otx1/Jaspar

Match Rank:5
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GGGSTTAMTG---
AGAGGGGATTAATTTAT
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A T G C A C G T A G C T C G T A G T A C A C G T A C T G A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

Pitx1/MA0682.1/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GGGSTTAMTG
GGGATTAA--
 A C T G A C T G A C T G A T G C A C G T A G C T C G T A G T A C A C G T A C T G
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGGSTTAMTG
NGGATTAN--
 A C T G A C T G A C T G A T G C A C G T A G C T C G T A G T A C A C G T A C T G
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T

PH0035.1_Gsc/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GGGSTTAMTG---
NNAAGGGATTAACGANT
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A T G C A C G T A G C T C G T A G T A C A C G T A C T G A C G T A C G T A C G T
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGGSTTAMTG
VRGGATTARN-
 A C G T A C T G A C T G A C T G A T G C A C G T A G C T C G T A G T A C A C G T A C T G
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GGGSTTAMTG--
TTAGAGGGATTAACAAT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A T G C A C G T A G C T C G T A G T A C A C G T A C T G A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T