Information for 7-CTCATTAGGG (Motif 10)

A G T C A C G T A G T C C G T A A G C T A C G T C G T A A C T G A C T G C A T G
Reverse Opposite:
G A T C A G T C A G T C A C G T C G T A C T G A A C G T A C T G C G T A T A C G
p-value:1e-11
log p-value:-2.640e+01
Information Content per bp:1.902
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets55.3 +/- 25.9bp
Average Position of motif in Background41.9 +/- 39.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EMX1/MA0612.1/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CTCATTAGGG
NNTAATTAGN-
 A C G T A G T C A C G T A G T C C G T A A G C T A C G T C G T A A C T G A C T G C A T G
T C A G A T C G G A C T G T C A G C T A G C A T A G C T C T G A C T A G A C T G A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:2
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CTCATTAGGG
AGCTCATTAT--
 A C G T A C G T A G T C A C G T A G T C C G T A A G C T A C G T C G T A A C T G A C T G C A T G
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:3
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----CTCATTAGGG--
NNNACCTCATTATCNTN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G C T A C G T C G T A A C T G A C T G C A T G A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:4
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----CTCATTAGGG--
GCAACCTCATTATNNNN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G C T A C G T C G T A A C T G A C T G C A T G A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

NOTO/MA0710.1/Jaspar

Match Rank:5
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CTCATTAGGG
GCTAATTAGC-
 A C G T A G T C A C G T A G T C C G T A A G C T A C G T C G T A A C T G A C T G C A T G
T A C G G A T C G C A T G T C A C G T A A C G T C A G T C T G A T C A G A T G C A C G T

EVX2/MA0888.1/Jaspar

Match Rank:6
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CTCATTAGGG
GGTAATTAGC-
 A C G T A G T C A C G T A G T C C G T A A G C T A C G T C G T A A C T G A C T G C A T G
T A C G T A C G G A C T T G C A T C G A A C G T A G C T C T G A T A C G A T G C A C G T

PDX1/MA0132.2/Jaspar

Match Rank:7
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CTCATTAGGG
GTAATTAG--
 A G T C A C G T A G T C C G T A A G C T A C G T C G T A A C T G A C T G C A T G
T A C G G A C T T G C A G T C A A C G T A C G T C G T A T C A G A C G T A C G T

HOXB3/MA0903.1/Jaspar

Match Rank:8
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CTCATTAGGG
ACTAATTAGC-
 A C G T A G T C A C G T A G T C C G T A A G C T A C G T C G T A A C T G A C T G C A T G
C T G A T A G C G A C T T G C A T C G A A G C T G A C T G C T A T C A G T G A C A C G T

HOXA2/MA0900.1/Jaspar

Match Rank:9
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CTCATTAGGG
CCTAATTACC-
 A C G T A G T C A C G T A G T C C G T A A G C T A C G T C G T A A C T G A C T G C A T G
T A G C T A G C G A C T T G C A T C G A A C G T G A C T G C T A T A G C T A G C A C G T

EVX1/MA0887.1/Jaspar

Match Rank:10
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CTCATTAGGG
GGTAATTAGC-
 A C G T A G T C A C G T A G T C C G T A A G C T A C G T C G T A A C T G A C T G C A T G
T C A G T A C G G A C T T C G A T C G A A C G T G A C T C T G A A T C G T A G C A C G T