Information for 6-GCAAGTCCTGGTG (Motif 9)

A C T G A G T C C G T A C T G A A C T G A C G T T A G C A G T C A C G T A C T G A C T G A C G T A C T G
Reverse Opposite:
G T A C G T C A A G T C A G T C C G T A A C T G A T C G C G T A A G T C A G C T C G A T A C T G A G T C
p-value:1e-10
log p-value:-2.318e+01
Information Content per bp:1.928
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif11.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets62.9 +/- 25.7bp
Average Position of motif in Background60.6 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCAAGTCCTGGTG
--ACATCCTGNT-
 A C T G A G T C C G T A C T G A A C T G A C G T T A G C A G T C A C G T A C T G A C T G A C G T A C T G
A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCAAGTCCTGGTG
AAGGCAAGTGT-----
 A C G T A C G T A C G T A C T G A G T C C G T A C T G A A C T G A C G T T A G C A G T C A C G T A C T G A C T G A C G T A C T G
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCAAGTCCTGGTG
---AGGCCTNG--
 A C T G A G T C C G T A C T G A A C T G A C G T T A G C A G T C A C G T A C T G A C T G A C G T A C T G
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCAAGTCCTGGTG
SDGCAGGTGCNS---
 A C G T A C G T A C T G A G T C C G T A C T G A A C T G A C G T T A G C A G T C A C G T A C T G A C T G A C G T A C T G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GCAAGTCCTGGTG--
-----NNCAGGTGNN
 A C T G A G T C C G T A C T G A A C T G A C G T T A G C A G T C A C G T A C T G A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GCAAGTCCTGGTG
--ACTTCCTGNT-
 A C T G A G T C C G T A C T G A A C T G A C G T T A G C A G T C A C G T A C T G A C T G A C G T A C T G
A C G T A C G T C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCAAGTCCTGGTG
GCACGTNC-----
 A C T G A G T C C G T A C T G A A C T G A C G T T A G C A G T C A C G T A C T G A C T G A C G T A C T G
A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GCAAGTCCTGGTG--
-----NNCAGGTGCG
 A C T G A G T C C G T A C T G A A C T G A C G T T A G C A G T C A C G T A C T G A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

TCF3/MA0522.2/Jaspar

Match Rank:9
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GCAAGTCCTGGTG--
-----NNCAGGTGTN
 A C T G A G T C C G T A C T G A A C T G A C G T T A G C A G T C A C G T A C T G A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GCAAGTCCTGGTG-----
---TNTCCTGCTGTGNNG
 A C T G A G T C C G T A C T G A A C T G A C G T T A G C A G T C A C G T A C T G A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G