p-value: | 1e-6 |
log p-value: | -1.521e+01 |
Information Content per bp: | 1.935 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.57% |
Number of Background Sequences with motif | 0.5 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 68.2 +/- 23.0bp |
Average Position of motif in Background | 28.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 1.6 |
Multiplicity (# of sites on avg that occur together) | 1.33 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0053.1_Rara_1/Jaspar
Match Rank: | 1 |
Score: | 0.82 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGACCTTTGAATG NNNGTGACCTTTGNNN- |
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PB0049.1_Nr2f2_1/Jaspar
Match Rank: | 2 |
Score: | 0.81 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGACCTTTGAATG NNNNTGACCTTTNNNN- |
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Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 3 |
Score: | 0.81 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGACCTTTGAATG CTGACCTTTG---- |
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Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer
Match Rank: | 4 |
Score: | 0.79 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGACCTTTGAATG TGACCTTTNCNT- |
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NR2F1/MA0017.2/Jaspar
Match Rank: | 5 |
Score: | 0.75 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGACCTTTGAATG CNNTTGACCTTTG---- |
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RARA(var.2)/MA0730.1/Jaspar
Match Rank: | 6 |
Score: | 0.74 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCTTTGAATG---- TGACCTTTGCATGACCT |
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RXRG/MA0856.1/Jaspar
Match Rank: | 7 |
Score: | 0.73 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCTTTGAATG- TGACCTTTGACCCC |
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Nr2f6/MA0677.1/Jaspar
Match Rank: | 8 |
Score: | 0.73 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCTTTGAATG- TGACCTTTGACCTN |
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Rxra/MA0512.2/Jaspar
Match Rank: | 9 |
Score: | 0.73 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCTTTGAATG- TGACCTTTGACCCC |
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RXRB/MA0855.1/Jaspar
Match Rank: | 10 |
Score: | 0.73 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCTTTGAATG- TGACCTTTGACCCC |
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