Information for 2-GGGAATGCCCTTCCCT (Motif 2)

A C T G C T A G C T A G G C T A C G T A A C G T A C T G T A G C A G T C G T A C A C G T C G A T A G T C A G T C A G T C C A G T
Reverse Opposite:
G T C A C T A G T A C G C T A G C G T A G T C A A C T G C T A G A T C G G T A C G T C A G C A T C A G T A G T C A G T C T G A C
p-value:1e-14
log p-value:-3.405e+01
Information Content per bp:1.652
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.26%
Number of Background Sequences with motif28.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets48.6 +/- 15.7bp
Average Position of motif in Background50.8 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFKB1/MA0105.4/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGGAATGCCCTTCCCT
AGGGGATTCCCCT-----
 A C G T A C G T A C T G C T A G C T A G G C T A C G T A A C G T A C T G T A G C A G T C G T A C A C G T C G A T A G T C A G T C A G T C C A G T
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGGAATGCCCTTCCCT
AGGGGAATCCCCT-----
 A C G T A C G T A C T G C T A G C T A G G C T A C G T A A C G T A C T G T A G C A G T C G T A C A C G T C G A T A G T C A G T C A G T C C A G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGGAATGCCCTTCCCT
GGGGGAATCCCC------
 A C G T A C G T A C T G C T A G C T A G G C T A C G T A A C G T A C T G T A G C A G T C G T A C A C G T C G A T A G T C A G T C A G T C C A G T
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GGGAATGCCCTTCCCT-
-----KGCCCTTCCCCA
 A C T G C T A G C T A G G C T A C G T A A C G T A C T G T A G C A G T C G T A C A C G T C G A T A G T C A G T C A G T C C A G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGGAATGCCCTTCCCT
GGAAATCCCC------
 A C T G C T A G C T A G G C T A C G T A A C G T A C T G T A G C A G T C G T A C A C G T C G A T A G T C A G T C A G T C C A G T
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGGAATGCCCTTCCCT
GGGAAATCCCCN----
 A C T G C T A G C T A G G C T A C G T A A C G T A C T G T A G C A G T C G T A C A C G T C G A T A G T C A G T C A G T C C A G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GGGAATGCCCTTCCCT-
-----TGACCTTTNCNT
 A C T G C T A G C T A G G C T A C G T A A C G T A C T G T A G C A G T C G T A C A C G T C G A T A G T C A G T C A G T C C A G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGGAATGCCCTTCCCT
GGAAATTCCC------
 A C T G C T A G C T A G G C T A C G T A A C G T A C T G T A G C A G T C G T A C A C G T C G A T A G T C A G T C A G T C C A G T
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GGGAATGCCCTTCCCT
----ATGACCTTGA--
 A C T G C T A G C T A G G C T A C G T A A C G T A C T G T A G C A G T C G T A C A C G T C G A T A G T C A G T C A G T C C A G T
A C G T A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGGAATGCCCTTCCCT-
NNNNATGACCTTGANTN
 A C T G C T A G C T A G G C T A C G T A A C G T A C T G T A G C A G T C G T A C A C G T C G A T A G T C A G T C A G T C C A G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A