Information for 6-TGAGAGCACA (Motif 19)

C G A T C A T G C T G A A C T G C G T A C T A G A G T C G C T A A G T C C G T A
Reverse Opposite:
A C G T A C T G C G A T A C T G A G T C A C G T T G A C G A C T G T A C G C T A
p-value:1e-9
log p-value:-2.087e+01
Information Content per bp:1.813
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif3.58%
Number of Background Sequences with motif273.8
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets55.5 +/- 24.2bp
Average Position of motif in Background52.9 +/- 35.4bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TGAGAGCACA----
NTNTATGTGCACATNNN
 A C G T A C G T A C G T C G A T C A T G C T G A A C T G C G T A C T A G A G T C G C T A A G T C C G T A A C G T A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGAGAGCACA---
-NWAACCACADNN
 C G A T C A T G C T G A A C T G C G T A C T A G A G T C G C T A A G T C C G T A A C G T A C G T A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGAGAGCACA-
-NAAACCACAG
 C G A T C A T G C T G A A C T G C G T A C T A G A G T C G C T A A G T C C G T A A C G T
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGAGAGCACA-----
NNNNTGAGCACTGTNNG
 A C G T A C G T C G A T C A T G C T G A A C T G C G T A C T A G A G T C G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGAGAGCACA--
--AAACCACAGC
 C G A T C A T G C T G A A C T G C G T A C T A G A G T C G C T A A G T C C G T A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGAGAGCACA---
--AAACCACAGAN
 C G A T C A T G C T G A A C T G C G T A C T A G A G T C G C T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

PB0026.1_Gm397_1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGAGAGCACA----
NNGTATGTGCACATNNN
 A C G T A C G T A C G T C G A T C A T G C T G A A C T G C G T A C T A G A G T C G C T A A G T C C G T A A C G T A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PB0208.1_Zscan4_2/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGAGAGCACA-------
-CGAAGCACACAAAATA
 C G A T C A T G C T G A A C T G C G T A C T A G A G T C G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGAGAGCACA--
--AAACCACANN
 C G A T C A T G C T G A A C T G C G T A C T A G A G T C G C T A A G T C C G T A A C G T A C G T
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TGAGAGCACA
---CAGCC--
 C G A T C A T G C T G A A C T G C G T A C T A G A G T C G C T A A G T C C G T A
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T