Information for 9-GCCCAGSTCAGGC (Motif 14)

A C T G A G T C A G T C G T A C T C G A A C T G A T C G A C G T A G T C G T C A A C T G A T C G A G T C
Reverse Opposite:
T C A G A T G C G T A C A C G T A C T G C G T A A T G C A G T C A G C T A C T G A C T G A C T G A G T C
p-value:1e-9
log p-value:-2.170e+01
Information Content per bp:1.829
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.70%
Number of Background Sequences with motif34.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets43.2 +/- 24.4bp
Average Position of motif in Background56.1 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCCCAGSTCAGGC
TGCCCAGNHW----
 A C G T A C T G A G T C A G T C G T A C T C G A A C T G A T C G A C G T A G T C G T C A A C T G A T C G A G T C
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCCCAGSTCAGGC-
CGCGCCGGGTCACGTA
 A C G T A C G T A C T G A G T C A G T C G T A C T C G A A C T G A T C G A C G T A G T C G T C A A C T G A T C G A G T C A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCCCAGSTCAGGC
-CAAAGGTCAG--
 A C T G A G T C A G T C G T A C T C G A A C T G A T C G A C G T A G T C G T C A A C T G A T C G A G T C
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GCCCAGSTCAGGC
----AGGTCA---
 A C T G A G T C A G T C G T A C T C G A A C T G A T C G A C G T A G T C G T C A A C T G A T C G A G T C
A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCCCAGSTCAGGC
GGCCCCGCCCCC--
 A C G T A C T G A G T C A G T C G T A C T C G A A C T G A T C G A C G T A G T C G T C A A C T G A T C G A G T C
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCCCAGSTCAGGC--
TCCCAGMCRAGCCCC
 A C T G A G T C A G T C G T A C T C G A A C T G A T C G A C G T A G T C G T C A A C T G A T C G A G T C A C G T A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCCCAGSTCAGGC
BTCAAGGTCA---
 A C T G A G T C A G T C G T A C T C G A A C T G A T C G A C G T A G T C G T C A A C T G A T C G A G T C
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCCCAGSTCAGGC
ATGCCCACC------
 A C G T A C G T A C T G A G T C A G T C G T A C T C G A A C T G A T C G A C G T A G T C G T C A A C T G A T C G A G T C
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCCCAGSTCAGGC
-TCAAGGTCAN--
 A C T G A G T C A G T C G T A C T C G A A C T G A T C G A C G T A G T C G T C A A C T G A T C G A G T C
A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCCCAGSTCAGGC
GGCCACRCCCMK--
 A C G T A C T G A G T C A G T C G T A C T C G A A C T G A T C G A C G T A G T C G T C A A C T G A T C G A G T C
C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G A C G T A C G T