Information for 4-TACTTTATAGTCT (Motif 5)

C G A T C T G A A G T C A C G T A C G T A G C T C G T A A G C T C T G A C T A G G A C T A T G C C G A T
Reverse Opposite:
C G T A A T C G C G T A G A T C A G C T C T G A A C G T C T G A C G T A G T C A T C A G A G C T C G T A
p-value:1e-14
log p-value:-3.447e+01
Information Content per bp:1.786
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.7 +/- 28.3bp
Average Position of motif in Background46.5 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TACTTTATAGTCT
DGWTTTATGRCN-
 C G A T C T G A A G T C A C G T A C G T A G C T C G T A A G C T C T G A C T A G G A C T A T G C C G A T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T

CDX2/MA0465.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TACTTTATAGTCT
--TTTTATGGCTN
 C G A T C T G A A G T C A C G T A C G T A G C T C G T A A G C T C T G A C T A G G A C T A T G C C G A T
A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

PH0075.1_Hoxd10/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TACTTTATAGTCT-
NTNAATTTTATTGNATT
 A C G T A C G T A C G T C G A T C T G A A G T C A C G T A C G T A G C T C G T A A G C T C T G A C T A G G A C T A T G C C G A T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TACTTTATAGTCT
--TTTTATTGC--
 C G A T C T G A A G T C A C G T A C G T A G C T C G T A A G C T C T G A C T A G G A C T A T G C C G A T
A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TACTTTATAGTCT--
NAATTTTATTACCNNN
 A C G T C G A T C T G A A G T C A C G T A C G T A G C T C G T A A G C T C T G A C T A G G A C T A T G C C G A T A C G T A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

POL012.1_TATA-Box/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TACTTTATAGTCT
NNNNNNCTTTTATAN---
 A C G T A C G T A C G T A C G T A C G T C G A T C T G A A G T C A C G T A C G T A G C T C G T A A G C T C T G A C T A G G A C T A T G C C G A T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TACTTTATAGTCT
TGATTTATGGCC-
 C G A T C T G A A G T C A C G T A C G T A G C T C G T A A G C T C T G A C T A G G A C T A T G C C G A T
C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C A C G T

TBP/MA0108.2/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TACTTTATAGTCT
NNNNNNCTTTTATAN---
 A C G T A C G T A C G T A C G T A C G T C G A T C T G A A G T C A C G T A C G T A G C T C G T A A G C T C T G A C T A G G A C T A T G C C G A T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T

PH0012.1_Cdx1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TACTTTATAGTCT--
NAATTTTATTACCTNN
 A C G T C G A T C T G A A G T C A C G T A C G T A G C T C G T A A G C T C T G A C T A G G A C T A T G C C G A T A C G T A C G T
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TACTTTATAGTCT
-NTTTTATGAC--
 C G A T C T G A A G T C A C G T A C G T A G C T C G T A A G C T C T G A C T A G G A C T A T G C C G A T
A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T