Information for 5-TMAANTTNCAAAGCCA (Motif 13)

C A G T G T C A C G T A C G T A C T G A C G A T A C G T G A T C G A T C C G T A C G T A C T G A A C T G A G T C A G T C G T C A
Reverse Opposite:
A C G T A C T G A C T G G T A C A G C T A C G T A C G T C A T G C T A G T C G A G C T A A G C T A C G T A C G T A C G T G C T A
p-value:1e-9
log p-value:-2.236e+01
Information Content per bp:1.742
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.2 +/- 22.5bp
Average Position of motif in Background61.7 +/- 43.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2/MA0505.1/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TMAANTTNCAAAGCCA--
---AAGTTCAAGGTCAGC
 C A G T G T C A C G T A C G T A C T G A C G A T A C G T G A T C G A T C C G T A C G T A C T G A A C T G A G T C A G T C G T C A A C G T A C G T
A C G T A C G T A C G T T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.60
Offset:6
Orientation:forward strand
Alignment:TMAANTTNCAAAGCCA
------NTCAAGGTCA
 C A G T G T C A C G T A C G T A C T G A C G A T A C G T G A T C G A T C C G T A C G T A C T G A A C T G A G T C A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.58
Offset:8
Orientation:forward strand
Alignment:TMAANTTNCAAAGCCA--
--------CAAGGHCANV
 C A G T G T C A C G T A C G T A C T G A C G A T A C G T G A T C G A T C C G T A C G T A C T G A A C T G A G T C A G T C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TMAANTTNCAAAGCCA
------BTCAAGGTCA
 C A G T G T C A C G T A C G T A C T G A C G A T A C G T G A T C G A T C C G T A C G T A C T G A A C T G A G T C A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TMAANTTNCAAAGCCA-
-CANAGNNCAAAGTCCA
 C A G T G T C A C G T A C G T A C T G A C G A T A C G T G A T C G A T C C G T A C G T A C T G A A C T G A G T C A G T C G T C A A C G T
A C G T G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

TCF7L2/MA0523.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TMAANTTNCAAAGCCA
--AAAGATCAAAGGAA
 C A G T G T C A C G T A C G T A C T G A C G A T A C G T G A T C G A T C C G T A C G T A C T G A A C T G A G T C A G T C G T C A
A C G T A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

Tcf7/MA0769.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TMAANTTNCAAAGCCA
--AAAGATCAAAGG--
 C A G T G T C A C G T A C G T A C T G A C G A T A C G T G A T C G A T C C G T A C G T A C T G A A C T G A G T C A G T C G T C A
A C G T A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TMAANTTNCAAAGCCA
----ACATCAAAGG--
 C A G T G T C A C G T A C G T A C T G A C G A T A C G T G A T C G A T C C G T A C G T A C T G A A C T G A G T C A G T C G T C A
A C G T A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TMAANTTNCAAAGCCA-
--AGAGTCCAAAGTCCA
 C A G T G T C A C G T A C G T A C T G A C G A T A C G T G A T C G A T C C G T A C G T A C T G A A C T G A G T C A G T C G T C A A C G T
A C G T A C G T C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TMAANTTNCAAAGCCA
--CGGTTTCAAA----
 C A G T G T C A C G T A C G T A C T G A C G A T A C G T G A T C G A T C C G T A C G T A C T G A A C T G A G T C A G T C G T C A
A C G T A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T