Information for 7-GAAAGAACACATT (Motif 4)

A C T G C G T A C T G A C G T A A C T G C G T A C G T A A G T C C G T A A G T C C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C T G A C G T A C T G A C G T A C G T A G T C C G A T A G C T C G A T A G T C
p-value:1e-10
log p-value:-2.486e+01
Information Content per bp:1.942
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.8 +/- 6.1bp
Average Position of motif in Background18.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAAAGAACACATT----
--AAGAACATWHTGTTC
 A C T G C G T A C T G A C G T A A C T G C G T A C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAAAGAACACATT
CCAGGAACAG---
 A C T G C G T A C T G A C G T A A C T G C G T A C G T A A G T C C G T A A G T C C G T A A C G T A C G T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GAAAGAACACATT---
-AGGGAAGTCATTTCT
 A C T G C G T A C T G A C G T A A C T G C G T A C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GAAAGAACACATT
--AAGGTCAC---
 A C T G C G T A C T G A C G T A A C T G C G T A C G T A A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GAAAGAACACATT-
AAAAATAACAAACGG
 A C G T A C T G C G T A C T G A C G T A A C T G C G T A C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAAAGAACACATT
-AAAGTAAACA--
 A C T G C G T A C T G A C G T A A C T G C G T A C G T A A G T C C G T A A G T C C G T A A C G T A C G T
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAAAGAACACATT
-AAAGTAAACA--
 A C T G C G T A C T G A C G T A A C T G C G T A C G T A A G T C C G T A A G T C C G T A A C G T A C G T
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GAAAGAACACATT-
--AAACAAACATTC
 A C T G C G T A C T G A C G T A A C T G C G T A C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

PB0130.1_Gm397_2/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GAAAGAACACATT---
AGCGGCACACACGCAA
 A C T G C G T A C T G A C G T A A C T G C G T A C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GAAAGAACACATT-
--NWAACCACADNN
 A C T G C G T A C T G A C G T A A C T G C G T A C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C