Motif 18

Information for 13-TCCACGCACCTAG (Motif 18)

Reverse Opposite:

p-value:	1e-6
log p-value:	-1.487e+01
Information Content per bp:	1.879
Number of Target Sequences with motif	4.0
Percentage of Target Sequences with motif	0.46%
Number of Background Sequences with motif	3.5
Percentage of Background Sequences with motif	0.01%
Average Position of motif in Targets	53.3 +/- 24.1bp
Average Position of motif in Background	60.3 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)	2.3
Multiplicity (# of sites on avg that occur together)	1.50
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:	1
Score:	0.62
Offset:	2
Orientation:	reverse strand
Alignment:	TCCACGCACCTAG --CACGCA-----

ZNF354C/MA0130.1/Jaspar

Match Rank:	2
Score:	0.61
Offset:	-1
Orientation:	forward strand
Alignment:	-TCCACGCACCTAG ATCCAC--------

PB0039.1_Klf7_1/Jaspar

Match Rank:	3
Score:	0.57
Offset:	-3
Orientation:	forward strand
Alignment:	---TCCACGCACCTAG TCGACCCCGCCCCTAT

SP3/MA0746.1/Jaspar

Match Rank:	4
Score:	0.57
Offset:	0
Orientation:	forward strand
Alignment:	TCCACGCACCTAG GCCACGCCCCC--

KLF16/MA0741.1/Jaspar

Match Rank:	5
Score:	0.56
Offset:	0
Orientation:	forward strand
Alignment:	TCCACGCACCTAG GCCACGCCCCC--

Klf12/MA0742.1/Jaspar

Match Rank:	6
Score:	0.56
Offset:	-1
Orientation:	forward strand
Alignment:	-TCCACGCACCTAG- GACCACGCCCTTATT

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:	7
Score:	0.56
Offset:	-1
Orientation:	forward strand
Alignment:	-TCCACGCACCTAG TBGCACGCAA----

TCF4/MA0830.1/Jaspar

Match Rank:	8
Score:	0.55
Offset:	4
Orientation:	forward strand
Alignment:	TCCACGCACCTAG- ----CGCACCTGCT

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:	9
Score:	0.54
Offset:	0
Orientation:	reverse strand
Alignment:	TCCACGCACCTAG---- NNTNCGCACCTGTNGAN

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:	10
Score:	0.54
Offset:	4
Orientation:	forward strand
Alignment:	TCCACGCACCTAG- ----NNCACCTGNN