Information for 12-TCCGTCTGCC (Motif 18)

A C G T A T G C A G T C A T C G A C G T G T A C A G C T A C T G G A T C A G T C
Reverse Opposite:
T C A G C T A G A G T C C T G A C A T G C G T A T A G C C T A G A T C G G T C A
p-value:1e-8
log p-value:-1.994e+01
Information Content per bp:1.757
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif4.37%
Number of Background Sequences with motif678.6
Percentage of Background Sequences with motif1.51%
Average Position of motif in Targets52.1 +/- 27.0bp
Average Position of motif in Background47.8 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TCCGTCTGCC
VBSYGTCTGG-
 A C G T A C G T A T G C A G T C A T C G A C G T G T A C A G C T A C T G G A T C A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TCCGTCTGCC
-CTGTCTGG-
 A C G T A T G C A G T C A T C G A C G T G T A C A G C T A C T G G A T C A G T C
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TCCGTCTGCC
GCCATCTGTT
 A C G T A T G C A G T C A T C G A C G T G T A C A G C T A C T G G A T C A G T C
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TCCGTCTGCC
ACCATCTGTT
 A C G T A T G C A G T C A T C G A C G T G T A C A G C T A C T G G A T C A G T C
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TCCGTCTGCC
RCCATMTGTT
 A C G T A T G C A G T C A T C G A C G T G T A C A G C T A C T G G A T C A G T C
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TCCGTCTGCC---
CCNNACCATCTGGCCTN
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T C G A C G T G T A C A G C T A C T G G A T C A G T C A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

Neurog1/MA0623.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCCGTCTGCC
ACCATATGGT
 A C G T A T G C A G T C A T C G A C G T G T A C A G C T A C T G G A T C A G T C
C T G A T A G C T G A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TCCGTCTGCC--
--GGTCTGGCAT
 A C G T A T G C A G T C A T C G A C G T G T A C A G C T A C T G G A T C A G T C A C G T A C G T
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TCCGTCTGCC----
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A T G C A G T C A T C G A C G T G T A C A G C T A C T G G A T C A G T C A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Bhlha15/MA0607.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCCGTCTGCC
-CCATATGT-
 A C G T A T G C A G T C A T C G A C G T G T A C A G C T A C T G G A T C A G T C
A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T