Information for 17-TGCAACGCACAGG (Motif 20)

A C G T A C T G A G T C C T G A C G T A A G T C A C T G A G T C C G T A A G T C C G T A A T C G A C T G
Reverse Opposite:
A G T C A T G C A C G T A C T G A C G T A C T G A G T C T C A G A C G T A G C T A C T G A G T C G T C A
p-value:1e-8
log p-value:-1.950e+01
Information Content per bp:1.910
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.2 +/- 28.3bp
Average Position of motif in Background17.1 +/- 4.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGCAACGCACAGG
TCCAATCCACA--
 A C G T A C T G A G T C C T G A C G T A A G T C A C T G A G T C C G T A A G T C C G T A A T C G A C T G
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGCAACGCACAGG
--CCAGGAACAG-
 A C G T A C T G A G T C C T G A C G T A A G T C A C T G A G T C C G T A A G T C C G T A A T C G A C T G
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:TGCAACGCACAGG
-------CACAGN
 A C G T A C T G A G T C C T G A C G T A A G T C A C T G A G T C C G T A A G T C C G T A A T C G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

PB0044.1_Mtf1_1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGCAACGCACAGG----
-NNTTTGCACACGGCCC
 A C G T A C T G A G T C C T G A C G T A A G T C A C T G A G T C C G T A A G T C C G T A A T C G A C T G A C G T A C G T A C G T A C G T
A C G T C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TGCAACGCACAGG-----
--CGAAGCACACAAAATA
 A C G T A C T G A G T C C T G A C G T A A G T C A C T G A G T C C G T A A G T C C G T A A T C G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TGCAACGCACAGG-
---AAACCACAGAN
 A C G T A C T G A G T C C T G A C G T A A G T C A C T G A G T C C G T A A G T C C G T A A T C G A C T G A C G T
A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGCAACGCACAGG
-SSAATCCACANN
 A C G T A C T G A G T C C T G A C G T A A G T C A C T G A G T C C G T A A G T C C G T A A T C G A C T G
A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

Myc/MA0147.2/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TGCAACGCACAGG-
----AAGCACATGG
 A C G T A C T G A G T C C T G A C G T A A G T C A C T G A G T C C G T A A G T C C G T A A T C G A C T G A C G T
A C G T A C G T A C G T A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G

EGR2/MA0472.2/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TGCAACGCACAGG--
----ACGCCCACGCA
 A C G T A C T G A G T C C T G A C G T A A G T C A C T G A G T C C G T A A G T C C G T A A T C G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGCAACGCACAGG
GGCCACRCCCMK-
 A C G T A C T G A G T C C T G A C G T A A G T C A C T G A G T C C G T A A G T C C G T A A T C G A C T G
C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G A C G T