Information for 9-ATGCCGGCCC (Motif 18)

C G T A C G A T T C A G T A G C T A G C T C A G A T C G T A G C G A T C T A G C
Reverse Opposite:
A C T G C T A G A T C G T A G C A G T C A T C G A T C G A G T C G C T A G C A T
p-value:1e-9
log p-value:-2.080e+01
Information Content per bp:1.660
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.30%
Number of Background Sequences with motif639.8
Percentage of Background Sequences with motif1.32%
Average Position of motif in Targets47.4 +/- 26.1bp
Average Position of motif in Background50.7 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ATGCCGGCCC---
ACTATGCCAACCTACC
 A C G T A C G T A C G T C G T A C G A T T C A G T A G C T A G C T C A G A T C G T A G C G A T C T A G C A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ATGCCGGCCC
ATGCCAACC-
 C G T A C G A T T C A G T A G C T A G C T C A G A T C G T A G C G A T C T A G C
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

GCM1/MA0646.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATGCCGGCCC
CATGCGGGTAC
 A C G T C G T A C G A T T C A G T A G C T A G C T C A G A T C G T A G C G A T C T A G C
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATGCCGGCCC
ATGCCCACC-
 C G T A C G A T T C A G T A G C T A G C T C A G A T C G T A G C G A T C T A G C
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATGCCGGCCC--
NNNNATGCGGGTNNNN
 A C G T A C G T A C G T A C G T C G T A C G A T T C A G T A G C T A G C T C A G A T C G T A G C G A T C T A G C A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

YY1(Zf)/Promoter/Homer

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ATGCCGGCCC
CAAGATGGCGGC--
 A C G T A C G T A C G T A C G T C G T A C G A T T C A G T A G C T A G C T C A G A T C G T A G C G A T C T A G C
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATGCCGGCCC-----
TCACCCCGCCCCAAATT
 A C G T A C G T C G T A C G A T T C A G T A G C T A G C T C A G A T C G T A G C G A T C T A G C A C G T A C G T A C G T A C G T A C G T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATGCCGGCCC-----
ATCCCCGCCCCTAAAA
 A C G T C G T A C G A T T C A G T A G C T A G C T C A G A T C G T A G C G A T C T A G C A C G T A C G T A C G T A C G T A C G T
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

GCM2/MA0767.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATGCCGGCCC
TATGCGGGTA-
 A C G T C G T A C G A T T C A G T A G C T A G C T C A G A T C G T A G C G A T C T A G C
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T

YY2/MA0748.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ATGCCGGCCC
TAATGGCGGNC-
 A C G T A C G T C G T A C G A T T C A G T A G C T A G C T C A G A T C G T A G C G A T C T A G C
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T