Information for 11-AGAAACCAGAGGA (Motif 13)

C T G A A C T G G T C A C G T A C G T A A G T C A G T C C G T A A C T G C G T A A C T G A T C G G T C A
Reverse Opposite:
A C G T A T G C A G T C A C G T A G T C A C G T A C T G A C T G A C G T A C G T A C G T A G T C A G C T
p-value:1e-9
log p-value:-2.252e+01
Information Content per bp:1.906
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.0 +/- 25.3bp
Average Position of motif in Background34.1 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGAAACCAGAGGA
-NAAACCACAG--
 C T G A A C T G G T C A C G T A C G T A A G T C A G T C C G T A A C T G C G T A A C T G A T C G G T C A
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AGAAACCAGAGGA
--AAACCACAGAN
 C T G A A C T G G T C A C G T A C G T A A G T C A G T C C G T A A C T G C G T A A C T G A T C G G T C A
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AGAAACCAGAGGA
--AAACCACAGC-
 C T G A A C T G G T C A C G T A C G T A A G T C A G T C C G T A A C T G C G T A A C T G A T C G G T C A
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AGAAACCAGAGGA
--AAACCACANN-
 C T G A A C T G G T C A C G T A C G T A A G T C A G T C C G T A A C T G C G T A A C T G A T C G G T C A
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGAAACCAGAGGA
-GWAAYHTGAKMC
 C T G A A C T G G T C A C G T A C G T A A G T C A G T C C G T A A C T G C G T A A C T G A T C G G T C A
A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGAAACCAGAGGA
AGAAACGAAAGT-
 C T G A A C T G G T C A C G T A C G T A A G T C A G T C C G T A A C T G C G T A A C T G A T C G G T C A
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGAAACCAGAGGA
--AAATCACAGCA
 C T G A A C T G G T C A C G T A C G T A A G T C A G T C C G T A A C T G C G T A A C T G A T C G G T C A
A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGAAACCAGAGGA
--ATGCCAGACN-
 C T G A A C T G G T C A C G T A C G T A A G T C A G T C C G T A A C T G C G T A A C T G A T C G G T C A
A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGAAACCAGAGGA
ACTGAAACCA-----
 A C G T A C G T C T G A A C T G G T C A C G T A C G T A A G T C A G T C C G T A A C T G C G T A A C T G A T C G G T C A
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGAAACCAGAGGA
-NWAACCACADNN
 C T G A A C T G G T C A C G T A C G T A A G T C A G T C C G T A A C T G C G T A A C T G A T C G G T C A
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C