Information for 4-AAAACCACCC (Motif 7)

T C G A G C T A T G C A T G C A T G A C G T A C C G T A T A G C G T A C G T A C
Reverse Opposite:
C A T G C A T G A T C G G C A T C A T G A C T G A C G T A C G T C G A T A G C T
p-value:1e-9
log p-value:-2.257e+01
Information Content per bp:1.592
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.53%
Number of Background Sequences with motif216.0
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets56.3 +/- 26.5bp
Average Position of motif in Background51.5 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AAAACCACCC-
-AAACCACANN
 T C G A G C T A T G C A T G C A T G A C G T A C C G T A T A G C G T A C G T A C A C G T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX2/MA0511.2/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AAAACCACCC
-AAACCGCAA
 T C G A G C T A T G C A T G C A T G A C G T A C C G T A T A G C G T A C G T A C
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

RUNX3/MA0684.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AAAACCACCC-
-AAACCGCAAA
 T C G A G C T A T G C A T G C A T G A C G T A C C G T A T A G C G T A C G T A C A C G T
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAAACCACCC
NAAACCACAG
 T C G A G C T A T G C A T G C A T G A C G T A C C G T A T A G C G T A C G T A C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AAAACCACCC--
-AAACCACAGAN
 T C G A G C T A T G C A T G C A T G A C G T A C C G T A T A G C G T A C G T A C A C G T A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

PB0167.1_Sox13_2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AAAACCACCC-----
ANNTNCCCACCCANNAC
 A C G T A C G T T C G A G C T A T G C A T G C A T G A C G T A C C G T A T A G C G T A C G T A C A C G T A C G T A C G T A C G T A C G T
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AAAACCACCC-
-AAACCACAGC
 T C G A G C T A T G C A T G C A T G A C G T A C C G T A T A G C G T A C G T A C A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAAACCACCC--
NWAACCACADNN
 T C G A G C T A T G C A T G C A T G A C G T A C C G T A T A G C G T A C G T A C A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

FOXP3/MA0850.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAAACCACCC
GTAAACA---
 T C G A G C T A T G C A T G C A T G A C G T A C C G T A T A G C G T A C G T A C
C T A G G A C T C G T A C T G A T C G A A G T C C T G A A C G T A C G T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AAAACCACCC-------
CCCCAAACCACCCCCCCCCA
 A C G T A C G T A C G T T C G A G C T A T G C A T G C A T G A C G T A C C G T A T A G C G T A C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C