Information for 8-AGGGCAAAAG (Motif 12)

G T C A A C T G A C T G C A T G T A G C G C T A T C G A C G T A C T G A T C A G
Reverse Opposite:
A G T C A G C T A C G T A G C T C G A T A T C G G T A C G T A C A G T C A C G T
p-value:1e-8
log p-value:-2.031e+01
Information Content per bp:1.823
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.22%
Number of Background Sequences with motif392.2
Percentage of Background Sequences with motif0.81%
Average Position of motif in Targets52.6 +/- 25.2bp
Average Position of motif in Background48.2 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rarg/MA0859.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AGGGCAAAAG-----
AAGGTCAAAAGGTCAA
 A C G T G T C A A C T G A C T G C A T G T A G C G C T A T C G A C G T A C T G A T C A G A C G T A C G T A C G T A C G T A C G T
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

Rarb/MA0857.1/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AGGGCAAAAG----
AAAGGTCAAAAGGTCA
 A C G T A C G T G T C A A C T G A C T G C A T G T A G C G C T A T C G A C G T A C T G A T C A G A C G T A C G T A C G T A C G T
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AGGGCAAAAG---
TAGGGCAAAGGTCA
 A C G T G T C A A C T G A C T G C A T G T A G C G C T A T C G A C G T A C T G A T C A G A C G T A C G T A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

RARA/MA0729.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGGGCAAAAG-------
GAGGTCAAAAGGTCAATG
 A C G T G T C A A C T G A C T G C A T G T A G C G C T A T C G A C G T A C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T C G A A C T G C A T G A G C T T A G C C T G A C G T A C G T A T G C A A C T G A C T G C G A T A G T C C T G A G C T A C A G T A C T G

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGGGCAAAAG----
GAGGTCAAAAGGTCA
 A C G T G T C A A C T G A C T G C A T G T A G C G C T A T C G A C G T A C T G A T C A G A C G T A C G T A C G T A C G T
T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AGGGCAAAAG---
GTAGGGCAAAGGTCA
 A C G T A C G T G T C A A C T G A C T G C A T G T A G C G C T A T C G A C G T A C T G A T C A G A C G T A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AGGGCAAAAG
TNNGGGCAG---
 A C G T A C G T G T C A A C T G A C T G C A T G T A G C G C T A T C G A C G T A C T G A T C A G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGGGCAAAAG--
ARGAGGMCAAAATGW
 A C G T A C G T A C G T G T C A A C T G A C T G C A T G T A G C G C T A T C G A C G T A C T G A T C A G A C G T A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGGGCAAAAG---
TGGGGCAAAGGTCA
 A C G T G T C A A C T G A C T G C A T G T A G C G C T A T C G A C G T A C T G A T C A G A C G T A C G T A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

NR2F1/MA0017.2/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGGGCAAAAG
CAAAGGTCAAGGG
 A C G T A C G T A C G T G T C A A C T G A C T G C A T G T A G C G C T A T C G A C G T A C T G A T C A G
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G