Information for 6-GAGTTGTTCC (Motif 10)

A T C G G T C A T A C G G A C T A C G T C T A G C G A T A C G T A T G C G T A C
Reverse Opposite:
A C T G A T C G T G C A G C T A G A T C T G C A C T G A A T G C A C G T A T G C
p-value:1e-9
log p-value:-2.159e+01
Information Content per bp:1.647
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.45%
Number of Background Sequences with motif421.9
Percentage of Background Sequences with motif0.87%
Average Position of motif in Targets50.0 +/- 27.3bp
Average Position of motif in Background50.1 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:1
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAGTTGTTCC-
TGATTTATGGCC
 A C G T A T C G G T C A T A C G G A C T A C G T C T A G C G A T A C G T A T G C G T A C A C G T
C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

SCRT2/MA0744.1/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAGTTGTTCC--
CCACCTGTTGCAT
 A C G T A T C G G T C A T A C G G A C T A C G T C T A G C G A T A C G T A T G C G T A C A C G T A C G T
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GAGTTGTTCC---
---CTGTTCCTGG
 A T C G G T C A T A C G G A C T A C G T C T A G C G A T A C G T A T G C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GAGTTGTTCC---
GCGGAGGTGTCGCCTC
 A C G T A C G T A C G T A T C G G T C A T A C G G A C T A C G T C T A G C G A T A C G T A T G C G T A C A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

Hoxc9/MA0485.1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GAGTTGTTCC-
NTGATTTATGGCC
 A C G T A C G T A T C G G T C A T A C G G A C T A C G T C T A G C G A T A C G T A T G C G T A C A C G T
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

SCRT1/MA0743.1/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GAGTTGTTCC--
ANCCACCTGTTGCNC
 A C G T A C G T A C G T A T C G G T C A T A C G G A C T A C G T C T A G C G A T A C G T A T G C G T A C A C G T A C G T
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GAGTTGTTCC-
----TTTTCCA
 A T C G G T C A T A C G G A C T A C G T C T A G C G A T A C G T A T G C G T A C A C G T
A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

PH0123.1_Obox3/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GAGTTGTTCC------
ATAGTTAATCCCCCNNA
 A C G T A T C G G T C A T A C G G A C T A C G T C T A G C G A T A C G T A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GAGTTGTTCC---
TGACCTTTGCCCTA
 A C G T A T C G G T C A T A C G G A C T A C G T C T A G C G A T A C G T A T G C G T A C A C G T A C G T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GAGTTGTTCC-
-TKCTGTTCCA
 A T C G G T C A T A C G G A C T A C G T C T A G C G A T A C G T A T G C G T A C A C G T
A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A