Information for 4-AAACCACAAM (Motif 6)

C G T A C G T A C T G A A G T C A G T C C G T A G T A C C G T A T G C A T G A C
Reverse Opposite:
A C T G A C G T A C G T A C T G A C G T A C T G A C T G A G C T A C G T C G A T
p-value:1e-11
log p-value:-2.622e+01
Information Content per bp:1.859
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.03%
Number of Background Sequences with motif99.4
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets41.7 +/- 31.0bp
Average Position of motif in Background50.2 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.95
Offset:0
Orientation:forward strand
Alignment:AAACCACAAM
AAACCACANN
 C G T A C G T A C T G A A G T C A G T C C G T A G T A C C G T A T G C A T G A C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:AAACCACAAM-
AAACCACAGAN
 C G T A C G T A C T G A A G T C A G T C C G T A G T A C C G T A T G C A T G A C A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-AAACCACAAM
NAAACCACAG-
 A C G T C G T A C G T A C T G A A G T C A G T C C G T A G T A C C G T A T G C A T G A C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:AAACCACAAM
AAACCACAGC
 C G T A C G T A C T G A A G T C A G T C C G T A G T A C C G T A T G C A T G A C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-AAACCACAAM-
NWAACCACADNN
 A C G T C G T A C G T A C T G A A G T C A G T C C G T A G T A C C G T A T G C A T G A C A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.88
Offset:0
Orientation:forward strand
Alignment:AAACCACAAM
AAACCGCAAA
 C G T A C G T A C T G A A G T C A G T C C G T A G T A C C G T A T G C A T G A C
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.85
Offset:0
Orientation:forward strand
Alignment:AAACCACAAM
AAACCGCAA-
 C G T A C G T A C T G A A G T C A G T C C G T A G T A C C G T A T G C A T G A C
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---AAACCACAAM
TCCAATCCACA--
 A C G T A C G T A C G T C G T A C G T A C T G A A G T C A G T C C G T A G T A C C G T A T G C A T G A C
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--AAACCACAAM
SSAATCCACANN
 A C G T A C G T C G T A C G T A C T G A A G T C A G T C C G T A G T A C C G T A T G C A T G A C
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

PB0122.1_Foxk1_2/Jaspar

Match Rank:10
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-AAACCACAAM----
CAAACAACAACACCT
 A C G T C G T A C G T A C T G A A G T C A G T C C G T A G T A C C G T A T G C A T G A C A C G T A C G T A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T