Information for 13-CACCTTTGTC (Motif 21)

A T G C C T G A A G T C A G T C A C G T A C G T A C G T A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C C G T A C G T A C G T A A C T G A C T G A G C T A T C G
p-value:1e-7
log p-value:-1.633e+01
Information Content per bp:1.945
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif20.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets56.9 +/- 29.2bp
Average Position of motif in Background56.5 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.83
Offset:2
Orientation:forward strand
Alignment:CACCTTTGTC
--CCTTTGTT
 A T G C C T G A A G T C A G T C A C G T A C G T A C G T A C T G A C G T A G T C
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.81
Offset:2
Orientation:forward strand
Alignment:CACCTTTGTC--
--CCTTTGTTTT
 A T G C C T G A A G T C A G T C A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.81
Offset:2
Orientation:forward strand
Alignment:CACCTTTGTC
--CCWTTGTY
 A T G C C T G A A G T C A G T C A C G T A C G T A C G T A C T G A C G T A G T C
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.78
Offset:2
Orientation:forward strand
Alignment:CACCTTTGTC--
--CCWTTGTYYB
 A T G C C T G A A G T C A G T C A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.77
Offset:2
Orientation:forward strand
Alignment:CACCTTTGTC--
--YCTTTGTTCC
 A T G C C T G A A G T C A G T C A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.76
Offset:3
Orientation:forward strand
Alignment:CACCTTTGTC
---CTTTGT-
 A T G C C T G A A G T C A G T C A C G T A C G T A C G T A C T G A C G T A G T C
A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.75
Offset:2
Orientation:forward strand
Alignment:CACCTTTGTC--
--CCATTGTTTT
 A T G C C T G A A G T C A G T C A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

PB0166.1_Sox12_2/Jaspar

Match Rank:8
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CACCTTTGTC-----
ANTCCTTTGTCTNNNN
 A C G T A T G C C T G A A G T C A G T C A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:9
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CACCTTTGTC-
-NCCATTGTTY
 A T G C C T G A A G T C A G T C A C G T A C G T A C G T A C T G A C G T A G T C A C G T
A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CACCTTTGTC
AGGVNCCTTTGT-
 A C G T A C G T A C G T A T G C C T G A A G T C A G T C A C G T A C G T A C G T A C T G A C G T A G T C
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T