Information for 8-GCCAGAAACT (Motif 15)

A T C G A T G C G T A C C G T A A C T G G T C A G C T A C T G A T G A C A C G T
Reverse Opposite:
G T C A A C T G A G C T C G A T A C G T G T A C A C G T A C T G A T C G T A G C
p-value:1e-9
log p-value:-2.083e+01
Information Content per bp:1.828
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.39%
Number of Background Sequences with motif203.9
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets46.2 +/- 22.3bp
Average Position of motif in Background47.0 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GCCAGAAACT
ATGCCAGACN--
 A C G T A C G T A T C G A T G C G T A C C G T A A C T G G T C A G C T A C T G A T G A C A C G T
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GCCAGAAACT
AAGCCATAAAA-
 A C G T A C G T A T C G A T G C G T A C C G T A A C T G G T C A G C T A C T G A T G A C A C G T
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCCAGAAACT---
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A T C G A T G C G T A C C G T A A C T G G T C A G C T A C T G A T G A C A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCCAGAAACT
GTCATAAAAN
 A T C G A T G C G T A C C G T A A C T G G T C A G C T A C T G A T G A C A C G T
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGAAACT
TGCCAA-----
 A C G T A T C G A T G C G T A C C G T A A C T G G T C A G C T A C T G A T G A C A C G T
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCCAGAAACT
CGTGCCAAG----
 A C G T A C G T A C G T A T C G A T G C G T A C C G T A A C T G G T C A G C T A C T G A T G A C A C G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCCAGAAACT
GCAATAAAA-
 A T C G A T G C G T A C C G T A A C T G G T C A G C T A C T G A T G A C A C G T
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCCAGAAACT--
AAAGGTAATAAAATTT
 A C G T A C G T A C G T A C G T A T C G A T G C G T A C C G T A A C T G G T C A G C T A C T G A T G A C A C G T A C G T A C G T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCCAGAAACT
-CCAGACAG-
 A T C G A T G C G T A C C G T A A C T G G T C A G C T A C T G A T G A C A C G T
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCCAGAAACT-
-ACTGAAACCA
 A T C G A T G C G T A C C G T A A C T G G T C A G C T A C T G A T G A C A C G T A C G T
A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A