Information for 6-TAATAAAAGG (Motif 13)

C G A T G T C A C G T A A G C T G C T A G T C A T C G A C G T A T A C G C T A G
Reverse Opposite:
A G T C A T G C A C G T A G C T A C G T C A G T T C G A A C G T A C G T C G T A
p-value:1e-9
log p-value:-2.163e+01
Information Content per bp:1.832
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.79%
Number of Background Sequences with motif99.5
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets47.8 +/- 19.8bp
Average Position of motif in Background52.3 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--TAATAAAAGG
NCYAATAAAA--
 A C G T A C G T C G A T G T C A C G T A A G C T G C T A G T C A T C G A C G T A T A C G C T A G
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:2
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TAATAAAAGG
GGTAATAAAAA-
 A C G T A C G T C G A T G T C A C G T A A G C T G C T A G T C A T C G A C G T A T A C G C T A G
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:3
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TAATAAAAGG
CCAATAAAAA-
 A C G T C G A T G T C A C G T A A G C T G C T A G T C A T C G A C G T A T A C G C T A G
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:4
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TAATAAAAGG
GTCATAAAAN-
 A C G T C G A T G T C A C G T A A G C T G C T A G T C A T C G A C G T A T A C G C T A G
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:5
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TAATAAAAGG
GCAATAAAA--
 A C G T C G A T G T C A C G T A A G C T G C T A G T C A T C G A C G T A T A C G C T A G
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:6
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----TAATAAAAGG--
TAGGTAATAAAATTCA
 A C G T A C G T A C G T A C G T C G A T G T C A C G T A A G C T G C T A G T C A T C G A C G T A T A C G C T A G A C G T A C G T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A

PH0075.1_Hoxd10/Jaspar

Match Rank:7
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----TAATAAAAGG---
AATGCAATAAAATTTAT
 A C G T A C G T A C G T A C G T C G A T G T C A C G T A A G C T G C T A G T C A T C G A C G T A T A C G C T A G A C G T A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

HOXA13/MA0650.1/Jaspar

Match Rank:8
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TAATAAAAGG
CCAATAAAAA-
 A C G T C G A T G T C A C G T A A G C T G C T A G T C A T C G A C G T A T A C G C T A G
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:9
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----TAATAAAAGG--
CTACCAATAAAATTCT
 A C G T A C G T A C G T A C G T C G A T G T C A C G T A A G C T G C T A G T C A T C G A C G T A T A C G C T A G A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:10
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TAATAAAAGG
CCYMATAAAA--
 A C G T A C G T C G A T G T C A C G T A A G C T G C T A G T C A T C G A C G T A T A C G C T A G
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T