Information for 11-TAAAAGTCTA (Motif 16)

C A G T G T C A C G T A C G T A C G T A A C T G A C G T A G T C A G C T C T G A
Reverse Opposite:
A G C T C T G A C T A G G T C A T A G C C G A T G C A T A C G T C A G T G T C A
p-value:1e-8
log p-value:-2.016e+01
Information Content per bp:1.828
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif131.7
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets52.6 +/- 24.1bp
Average Position of motif in Background51.4 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TAAAAGTCTA
-AAAAGTCAA
 C A G T G T C A C G T A C G T A C G T A A C T G A C G T A G T C A G C T C T G A
A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TAAAAGTCTA----
GGCAAAAGTCCAATAA
 A C G T A C G T C A G T G T C A C G T A C G T A C G T A A C T G A C G T A G T C A G C T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

Hnf4a/MA0114.3/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TAAAAGTCTA--
GGGGTCAAAGTCCAAT
 A C G T A C G T A C G T A C G T C A G T G T C A C G T A C G T A C G T A A C T G A C G T A G T C A G C T C T G A A C G T A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TAAAAGTCTA-
---TWGTCTGV
 C A G T G T C A C G T A C G T A C G T A A C T G A C G T A G T C A G C T C T G A A C G T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TAAAAGTCTA
NTAATKGTTT-
 A C G T C A G T G T C A C G T A C G T A C G T A A C T G A C G T A G T C A G C T C T G A
A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:6
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------TAAAAGTCTA
CTACCAATAAAATTCT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T G T C A C G T A C G T A C G T A A C T G A C G T A G T C A G C T C T G A
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TAAAAGTCTA
NCYAATAAAA-----
 A C G T A C G T A C G T A C G T A C G T C A G T G T C A C G T A C G T A C G T A A C T G A C G T A G T C A G C T C T G A
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:8
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TAAAAGTCTA
GNCTATAAAAGG---
 A C G T A C G T A C G T A C G T A C G T C A G T G T C A C G T A C G T A C G T A A C T G A C G T A G T C A G C T C T G A
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TAAAAGTCTA
ANGNAAAGGTCA-
 A C G T A C G T A C G T C A G T G T C A C G T A C G T A C G T A A C T G A C G T A G T C A G C T C T G A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------TAAAAGTCTA
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T C A G T G T C A C G T A C G T A C G T A A C T G A C G T A G T C A G C T C T G A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A