Information for 3-TTTGAAAACCACA (Motif 6)

A G C T C G A T C G A T C A T G G T C A C G T A C G T A C T G A G A T C A G T C C G T A T G A C C G T A
Reverse Opposite:
C G A T A C T G A C G T A C T G C A T G A G C T A C G T A C G T A C G T G T A C C G T A C G T A C T G A
p-value:1e-12
log p-value:-2.986e+01
Information Content per bp:1.791
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif44.7
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets61.3 +/- 24.5bp
Average Position of motif in Background49.0 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.78
Offset:5
Orientation:forward strand
Alignment:TTTGAAAACCACA--
-----AAACCACANN
 A G C T C G A T C G A T C A T G G T C A C G T A C G T A C T G A G A T C A G T C C G T A T G A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.75
Offset:5
Orientation:reverse strand
Alignment:TTTGAAAACCACA---
-----AAACCACAGAN
 A G C T C G A T C G A T C A T G G T C A C G T A C G T A C T G A G A T C A G T C C G T A T G A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.74
Offset:4
Orientation:forward strand
Alignment:TTTGAAAACCACA-
----NAAACCACAG
 A G C T C G A T C G A T C A T G G T C A C G T A C G T A C T G A G A T C A G T C C G T A T G A C C G T A A C G T
A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.73
Offset:4
Orientation:forward strand
Alignment:TTTGAAAACCACA---
----NWAACCACADNN
 A G C T C G A T C G A T C A T G G T C A C G T A C G T A C T G A G A T C A G T C C G T A T G A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.73
Offset:5
Orientation:reverse strand
Alignment:TTTGAAAACCACA--
-----AAACCACAGC
 A G C T C G A T C G A T C A T G G T C A C G T A C G T A C T G A G A T C A G T C C G T A T G A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:6
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTTGAAAACCACA
TTTGAAACCG---
 A G C T C G A T C G A T C A T G G T C A C G T A C G T A C T G A G A T C A G T C C G T A T G A C C G T A
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.67
Offset:5
Orientation:forward strand
Alignment:TTTGAAAACCACA--
-----AAACCGCAAA
 A G C T C G A T C G A T C A T G G T C A C G T A C G T A C T G A G A T C A G T C C G T A T G A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX2/MA0511.2/Jaspar

Match Rank:8
Score:0.66
Offset:5
Orientation:forward strand
Alignment:TTTGAAAACCACA-
-----AAACCGCAA
 A G C T C G A T C G A T C A T G G T C A C G T A C G T A C T G A G A T C A G T C C G T A T G A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TTTGAAAACCACA
--TCCAATCCACA
 A G C T C G A T C G A T C A T G G T C A C G T A C G T A C T G A G A T C A G T C C G T A T G A C C G T A
A C G T A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TTTGAAAACCACA--
---SSAATCCACANN
 A G C T C G A T C G A T C A T G G T C A C G T A C G T A C T G A G A T C A G T C C G T A T G A C C G T A A C G T A C G T
A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C