Information for 15-HTGACAATATTDT (Motif 25)

G A T C A C G T A C T G C G T A G T A C C G T A C G T A A C G T C G T A A C G T A C G T C A T G A C G T
Reverse Opposite:
C G T A G A T C G T C A C G T A A C G T C G T A A C G T A C G T A C T G C G A T A G T C C G T A C A T G
p-value:1e-7
log p-value:-1.823e+01
Information Content per bp:1.854
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.7 +/- 18.5bp
Average Position of motif in Background51.9 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-HTGACAATATTDT
NNTNNCAATATTAG
 A C G T G A T C A C G T A C T G C G T A G T A C C G T A C G T A A C G T C G T A A C G T A C G T C A T G A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-HTGACAATATTDT
NNTNNCAATATTAG
 A C G T G A T C A C G T A C T G C G T A G T A C C G T A C G T A A C G T C G T A A C G T A C G T C A T G A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

FOXB1/MA0845.1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-HTGACAATATTDT
TATGTAAATAT---
 A C G T G A T C A C G T A C T G C G T A G T A C C G T A C G T A A C G T C G T A A C G T A C G T C A T G A C G T
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-HTGACAATATTDT
TATGTAAATAT---
 A C G T G A T C A C G T A C T G C G T A G T A C C G T A C G T A A C G T C G T A A C G T A C G T C A T G A C G T
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-HTGACAATATTDT
RHTGWCAR------
 A C G T G A T C A C G T A C T G C G T A G T A C C G T A C G T A A C G T C G T A A C G T A C G T C A T G A C G T
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:HTGACAATATTDT
--GACAATGNN--
 G A T C A C G T A C T G C G T A G T A C C G T A C G T A A C G T C G T A A C G T A C G T C A T G A C G T
A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:HTGACAATATTDT------
---AANTTATTGTTCTNNA
 G A T C A C G T A C T G C G T A G T A C C G T A C G T A A C G T C G T A A C G T A C G T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PH0169.1_Tgif1/Jaspar

Match Rank:8
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------HTGACAATATTDT
NNNCAGCTGTCAATATN--
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G C G T A G T A C C G T A C G T A A C G T C G T A A C G T A C G T C A T G A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--HTGACAATATTDT
ARNTGACA-------
 A C G T A C G T G A T C A C G T A C T G C G T A G T A C C G T A C G T A A C G T C G T A A C G T A C G T C A T G A C G T
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:HTGACAATATTDT------
--GGAAAAATTGTTAGGAA
 G A T C A C G T A C T G C G T A G T A C C G T A C G T A A C G T C G T A A C G T A C G T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A