Information for 10-CKCGTGGGMA (Motif 23)

A T G C C A T G A G T C A T C G G A C T C A T G A C T G T A C G G T C A G T C A
Reverse Opposite:
A C G T A C G T A G T C A G T C G A T C C T G A A T G C C T A G G T A C A T C G
p-value:1e-8
log p-value:-1.900e+01
Information Content per bp:1.754
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif102.0
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets49.7 +/- 27.6bp
Average Position of motif in Background51.2 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:CKCGTGGGMA--
--CSTGGGAAAD
 A T G C C A T G A G T C A T C G G A C T C A T G A C T G T A C G G T C A G T C A A C G T A C G T
A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

Hes1/MA1099.1/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CKCGTGGGMA
NNCGCGTGNN--
 A C G T A C G T A T G C C A T G A G T C A T C G G A C T C A T G A C T G T A C G G T C A G T C A
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CKCGTGGGMA--
NGCGTGGGCGGR
 A T G C C A T G A G T C A T C G G A C T C A T G A C T G T A C G G T C A G T C A A C G T A C G T
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CKCGTGGGMA
CACGTGGN--
 A T G C C A T G A G T C A T C G G A C T C A T G A C T G T A C G G T C A G T C A
G T A C C T G A A G T C C T A G G A C T A C T G A T C G A G C T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CKCGTGGGMA-
--NGTGGGCAT
 A T G C C A T G A G T C A T C G G A C T C A T G A C T G T A C G G T C A G T C A A C G T
A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

EGR2/MA0472.2/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CKCGTGGGMA-
TGCGTGGGCGT
 A T G C C A T G A G T C A T C G G A C T C A T G A C T G T A C G G T C A G T C A A C G T
G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T

Mycn/MA0104.3/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CKCGTGGGMA
CACGTGGC--
 A T G C C A T G A G T C A T C G G A C T C A T G A C T G T A C G G T C A G T C A
A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CKCGTGGGMA---
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T A T G C C A T G A G T C A T C G G A C T C A T G A C T G T A C G G T C A G T C A A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CKCGTGGGMA
NNCCACGTGG---
 A C G T A C G T A C G T A T G C C A T G A G T C A T C G G A C T C A T G A C T G T A C G G T C A G T C A
T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CKCGTGGGMA
TGCGTG----
 A T G C C A T G A G T C A T C G G A C T C A T G A C T G T A C G G T C A G T C A
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T