Information for 11-GGCACCAWKKCAC (Motif 16)

C T A G C T A G A G T C C G T A A G T C A G T C C G T A C G A T A C T G A C G T A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G G T C A G T A C G C A T A C G T A C T G A C T G A C G T A C T G A G T C A G T C
p-value:1e-9
log p-value:-2.137e+01
Information Content per bp:1.888
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.5 +/- 21.7bp
Average Position of motif in Background40.8 +/- 10.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGCACCAWKKCAC
TGGCACCATGCCAA
 A C G T C T A G C T A G A G T C C G T A A G T C A G T C C G T A C G A T A C T G A C G T A G T C C G T A A G T C
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

E2F1/MA0024.3/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGCACCAWKKCAC
TTTGGCGCCAAA----
 A C G T A C G T A C G T C T A G C T A G A G T C C G T A A G T C A G T C C G T A C G A T A C T G A C G T A G T C C G T A A G T C
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GGCACCAWKKCAC
NGTGGGCAT--------
 A C G T A C G T A C G T A C G T C T A G C T A G A G T C C G T A A G T C A G T C C G T A C G A T A C T G A C G T A G T C C G T A A G T C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GGCACCAWKKCAC
AGCTCGGCGCCAAAAGC-
 A C G T A C G T A C G T A C G T A C G T C T A G C T A G A G T C C G T A A G T C A G T C C G T A C G A T A C T G A C G T A G T C C G T A A G T C
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGCACCAWKKCAC
TGGCAGNCTGCCAG
 A C G T C T A G C T A G A G T C C G T A A G T C A G T C C G T A C G A T A C T G A C G T A G T C C G T A A G T C
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

PB0112.1_E2F2_2/Jaspar

Match Rank:6
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GGCACCAWKKCAC
CCTTCGGCGCCAAAAGG-
 A C G T A C G T A C G T A C G T A C G T C T A G C T A G A G T C C G T A A G T C A G T C C G T A C G A T A C T G A C G T A G T C C G T A A G T C
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GGCACCAWKKCAC
CTTGGCANNNTGCCAA
 A C G T A C G T A C G T C T A G C T A G A G T C C G T A A G T C A G T C C G T A C G A T A C T G A C G T A G T C C G T A A G T C
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

PB0200.1_Zfp187_2/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GGCACCAWKKCAC
NNAGGGACAAGGGCNC
 A C G T A C G T A C G T C T A G C T A G A G T C C G T A A G T C A G T C C G T A C G A T A C T G A C G T A G T C C G T A A G T C
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GGCACCAWKKCAC
GGTTGGCAT--------
 A C G T A C G T A C G T A C G T C T A G C T A G A G T C C G T A A G T C A G T C C G T A C G A T A C T G A C G T A G T C C G T A A G T C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GGCACCAWKKCAC
RGGGCACTAACY---
 A C G T A C G T C T A G C T A G A G T C C G T A A G T C A G T C C G T A C G A T A C T G A C G T A G T C C G T A A G T C
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T A C G T A C G T