Information for 6-GCCTAAGGGA (Motif 7)

A C T G A G T C G T A C C G A T G T C A C T G A C A T G A C T G A C T G C G T A
Reverse Opposite:
C G A T A G T C G T A C G T A C A G C T A C G T C G T A A C T G C T A G A G T C
p-value:1e-11
log p-value:-2.583e+01
Information Content per bp:1.849
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.79%
Number of Background Sequences with motif64.2
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets52.0 +/- 28.5bp
Average Position of motif in Background52.3 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GCCTAAGGGA--
GCCTCAGGGCAT
 A C T G A G T C G T A C C G A T G T C A C T G A C A T G A C T G A C T G C G T A A C G T A C G T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GCCTAAGGGA--
SCCTSAGGSCAW
 A C T G A G T C G T A C C G A T G T C A C T G A C A T G A C T G A C T G C G T A A C G T A C G T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GCCTAAGGGA
AGCCTCAGGCA
 A C G T A C T G A G T C G T A C C G A T G T C A C T G A C A T G A C T G A C T G C G T A
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCCTAAGGGA
AGCCTCAGGCA
 A C G T A C T G A G T C G T A C C G A T G T C A C T G A C A T G A C T G A C T G C G T A
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:5
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GCCTAAGGGA--
NTCGCCTCAGGCAAT
 A C G T A C G T A C G T A C T G A G T C G T A C C G A T G T C A C T G A C A T G A C T G A C T G C G T A A C G T A C G T
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:6
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GCCTAAGGGA--
NTCCCCTCAGGGANT
 A C G T A C G T A C G T A C T G A G T C G T A C C G A T G T C A C T G A C A T G A C T G A C T G C G T A A C G T A C G T
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:7
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GCCTAAGGGA--
NTNGCCTCAGGCNNN
 A C G T A C G T A C G T A C T G A G T C G T A C C G A T G T C A C T G A C A T G A C T G A C T G C G T A A C G T A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:8
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GCCTAAGGGA
--CTAATKGV
 A C T G A G T C G T A C C G A T G T C A C T G A C A T G A C T G A C T G C G T A
A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

TFAP2A/MA0003.3/Jaspar

Match Rank:9
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCCTAAGGGA
NGCCTGAGGCN
 A C G T A C T G A G T C G T A C C G A T G T C A C T G A C A T G A C T G A C T G C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCCTAAGGGA-
TGCCCNGGGGCA
 A C G T A C T G A G T C G T A C C G A T G T C A C T G A C A T G A C T G A C T G C G T A A C G T
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A