Information for 6-AGCTGGCAACAGG (Motif 6)

C G T A C T A G A T G C A C G T A C T G A C T G G T A C G T C A C G T A A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C G T A C C G A T A C T G A C G T A C G T C A T G A G T C G T A C C G T A A T C G A G T C A C G T
p-value:1e-11
log p-value:-2.678e+01
Information Content per bp:1.841
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif20.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.0 +/- 26.0bp
Average Position of motif in Background53.0 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGCTGGCAACAGG
SCCTAGCAACAG-
 C G T A C T A G A T G C A C G T A C T G A C T G G T A C G T C A C G T A A G T C C G T A A C T G A C T G
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AGCTGGCAACAGG---
---ATGCAACAGGTGG
 C G T A C T A G A T G C A C G T A C T G A C T G G T A C G T C A C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

SCRT1/MA0743.1/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGCTGGCAACAGG-----
---GAGCAACAGGTGGTT
 C G T A C T A G A T G C A C G T A C T G A C T G G T A C G T C A C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGCTGGCAACAGG
---TTGCAACATN
 C G T A C T A G A T G C A C G T A C T G A C T G G T A C G T C A C G T A A G T C C G T A A C T G A C T G
A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AGCTGGCAACAGG
NAACAGCTGG-------
 A C G T A C G T A C G T A C G T C G T A C T A G A T G C A C G T A C T G A C T G G T A C G T C A C G T A A G T C C G T A A C T G A C T G
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AGCTGGCAACAGG
AACTAGCTGTCAATAC-
 A C G T A C G T A C G T A C G T C G T A C T A G A T G C A C G T A C T G A C T G G T A C G T C A C G T A A G T C C G T A A C T G A C T G
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C A C G T

PH0102.1_Meis1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AGCTGGCAACAGG
AACGAGCTGTCAATAC-
 A C G T A C G T A C G T A C G T C G T A C T A G A T G C A C G T A C T G A C T G G T A C G T C A C G T A A G T C C G T A A C T G A C T G
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C A C G T

PH0104.1_Meis2/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AGCTGGCAACAGG
AAAGACCTGTCAATAC-
 A C G T A C G T A C G T A C G T C G T A C T A G A T G C A C G T A C T G A C T G G T A C G T C A C G T A A G T C C G T A A C T G A C T G
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AGCTGGCAACAGG
NAHCAGCTGD-------
 A C G T A C G T A C G T A C G T C G T A C T A G A T G C A C G T A C T G A C T G G T A C G T C A C G T A A G T C C G T A A C T G A C T G
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGCTGGCAACAGG-
---TGTAAACAGGA
 C G T A C T A G A T G C A C G T A C T G A C T G G T A C G T C A C G T A A G T C C G T A A C T G A C T G A C G T
A C G T A C G T A C G T C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A