Information for 14-CTGCTATTAT (Motif 21)

A G T C A C G T A C T G A G T C A C G T C G T A A C G T A G C T C G T A A C G T
Reverse Opposite:
C G T A A C G T C T G A G T C A A C G T C G T A A C T G A G T C C G T A A C T G
p-value:1e-3
log p-value:-8.368e+00
Information Content per bp:1.942
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif18.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets61.9 +/- 25.8bp
Average Position of motif in Background52.4 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2C/MA0497.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTGCTATTAT------
-TTCTATTTTTAGNNN
 A G T C A C G T A C T G A G T C A C G T C G T A A C G T A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTGCTATTAT----
--KCTATTTTTRGH
 A G T C A C G T A C T G A G T C A C G T C G T A A C G T A G C T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTGCTATTAT----
--GCTATTTTTAGC
 A G T C A C G T A C T G A G T C A C G T C G T A A C G T A G C T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTGCTATTAT---
---CTATTTTTGG
 A G T C A C G T A C T G A G T C A C G T C G T A A C G T A G C T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

PB0122.1_Foxk1_2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTGCTATTAT---
NNNTGTTGTTGTTNG
 A C G T A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C G T A G C T C G T A A C G T A C G T A C G T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTGCTATTAT----
TNNTGCTACTGTNNNN
 A C G T A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C G T A G C T C G T A A C G T A C G T A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

BARX1/MA0875.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTGCTATTAT
--GCAATTAG
 A G T C A C G T A C T G A G T C A C G T C G T A A C G T A G C T C G T A A C G T
A C G T A C G T T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G

Nkx2-5/MA0063.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTGCTATTAT
---CAATTAA
 A G T C A C G T A C T G A G T C A C G T C G T A A C G T A G C T C G T A A C G T
A C G T A C G T A C G T G T A C C G T A G T C A A C G T A C G T C T G A G C T A

PB0119.1_Foxa2_2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTATTAT-
NCNTTTGTTATTTNN
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C G T A G C T C G T A A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PH0022.1_Dlx3/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTGCTATTAT-----
NNNGGTAATTATNGNGN
 A C G T A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C G T A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A