Information for 12-CAAGTTDCTTTCT (Motif 17)

A G T C C G T A C G T A A T C G C G A T A C G T C A T G A T G C A C G T A C G T A G C T A G T C A G C T
Reverse Opposite:
C T G A C T A G C T G A C G T A C G T A A T C G G A T C C G T A C G T A A T G C A C G T A C G T C T A G
p-value:1e-7
log p-value:-1.741e+01
Information Content per bp:1.844
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif28.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets50.8 +/- 27.0bp
Average Position of motif in Background56.0 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAAGTTDCTTTCT--
TCAGTTTCATTTTCC
 A G T C C G T A C G T A A T C G C G A T A C G T C A T G A T G C A C G T A C G T A G C T A G T C A G C T A C G T A C G T
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAAGTTDCTTTCT
-CAGCTGTTTCCT
 A G T C C G T A C G T A A T C G C G A T A C G T C A T G A T G C A C G T A C G T A G C T A G T C A G C T
A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CAAGTTDCTTTCT-
--AGTTTCAKTTTC
 A G T C C G T A C G T A A T C G C G A T A C G T C A T G A T G C A C G T A C G T A G C T A G T C A G C T A C G T
A C G T A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAAGTTDCTTTCT-
AGAAATGACTTCCCT
 A C G T A G T C C G T A C G T A A T C G C G A T A C G T C A T G A T G C A C G T A C G T A G C T A G T C A G C T A C G T
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CAAGTTDCTTTCT-
--AGTTTCAGTTTC
 A G T C C G T A C G T A A T C G C G A T A C G T C A T G A T G C A C G T A C G T A G C T A G T C A G C T A C G T
A C G T A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAAGTTDCTTTCT------
-NAGTTTCABTHTGACTNW
 A G T C C G T A C G T A A T C G C G A T A C G T C A T G A T G C A C G T A C G T A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CAAGTTDCTTTCT
GKVTCADRTTWC-----
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A A T C G C G A T A C G T C A T G A T G C A C G T A C G T A G C T A G T C A G C T
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAAGTTDCTTTCT
-ACTTTCGTTTCT
 A G T C C G T A C G T A A T C G C G A T A C G T C A T G A T G C A C G T A C G T A G C T A G T C A G C T
A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CAAGTTDCTTTCT------
---ANTCCTTTGTCTNNNN
 A G T C C G T A C G T A A T C G C G A T A C G T C A T G A T G C A C G T A C G T A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CAAGTTDCTTTCT
-CACTTCCYCTTT
 A G T C C G T A C G T A A T C G C G A T A C G T C A T G A T G C A C G T A C G T A G C T A G T C A G C T
A C G T T A G C T C G A A T G C A C G T A C G T A G T C A G T C A G C T G A T C G C A T G A C T G C A T