Information for 8-AGTGCTATAG (Motif 13)

C G T A A C T G A G C T A C T G G T A C A C G T C G T A A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A C G T C G T A A C T G A G T C C T G A A G T C A C G T
p-value:1e-8
log p-value:-2.070e+01
Information Content per bp:1.955
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.8 +/- 17.0bp
Average Position of motif in Background35.8 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGTGCTATAG
TTAAGTGCTT---
 A C G T A C G T A C G T C G T A A C T G A G C T A C T G G T A C A C G T C G T A A C G T C G T A A C T G
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGTGCTATAG
TTRAGTGSYK---
 A C G T A C G T A C G T C G T A A C T G A G C T A C T G G T A C A C G T C G T A A C G T C G T A A C T G
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGTGCTATAG
CTYRAGTGSY----
 A C G T A C G T A C G T A C G T C G T A A C T G A G C T A C T G G T A C A C G T C G T A A C G T C G T A A C T G
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGTGCTATAG
TTGAGTGSTT---
 A C G T A C G T A C G T C G T A A C T G A G C T A C T G G T A C A C G T C G T A A C G T C G T A A C T G
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGTGCTATAG-
AGATGCAATCCC
 A C G T C G T A A C T G A G C T A C T G G T A C A C G T C G T A A C G T C G T A A C T G A C G T
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----AGTGCTATAG
NTCAAGTGGN----
 A C G T A C G T A C G T A C G T C G T A A C T G A G C T A C T G G T A C A C G T C G T A A C G T C G T A A C T G
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AGTGCTATAG--
AACAATGNTATTGTT
 A C G T A C G T A C G T C G T A A C T G A G C T A C T G G T A C A C G T C G T A A C G T C G T A A C T G A C G T A C G T
T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----AGTGCTATAG
NTCAAGTGG-----
 A C G T A C G T A C G T A C G T C G T A A C T G A G C T A C T G G T A C A C G T C G T A A C G T C G T A A C T G
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----AGTGCTATAG-
CNTTAAGTACTTAANG
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G C T A C T G G T A C A C G T C G T A A C G T C G T A A C T G A C G T
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AGTGCTATAG
BTBRAGTGSN----
 A C G T A C G T A C G T A C G T C G T A A C T G A G C T A C T G G T A C A C G T C G T A A C G T C G T A A C T G
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T