Information for 1-GTTAATGATTAACTWW (Motif 1)

C A T G A C G T G C A T C G T A C T G A C G A T A C T G C G T A C A G T A G C T C T G A T C G A G A T C G C A T G C T A C G T A
Reverse Opposite:
C G A T C G A T C G T A C T A G A G C T G A C T C T G A G T C A G C A T T G A C C G T A A G C T C G A T C G T A C G T A G T A C
p-value:1e-109
log p-value:-2.532e+02
Information Content per bp:1.588
Number of Target Sequences with motif148.0
Percentage of Target Sequences with motif18.97%
Number of Background Sequences with motif738.6
Percentage of Background Sequences with motif1.53%
Average Position of motif in Targets51.5 +/- 23.1bp
Average Position of motif in Background51.3 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF1A/MA0046.2/Jaspar

Match Rank:1
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-GTTAATGATTAACTWW
NGTTAATNATTAACN--
 A C G T C A T G A C G T G C A T C G T A C T G A C G A T A C T G C G T A C A G T A G C T C T G A T C G A G A T C G C A T G C T A C G T A
C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T A C G T A C G T

HNF1B/MA0153.2/Jaspar

Match Rank:2
Score:0.96
Offset:0
Orientation:forward strand
Alignment:GTTAATGATTAACTWW
GTTAATGATTAAC---
 C A T G A C G T G C A T C G T A C T G A C G A T A C T G C G T A C A G T A G C T C T G A T C G A G A T C G C A T G C T A C G T A
C A T G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C T G A T C G A G A T C A C G T A C G T A C G T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.95
Offset:0
Orientation:forward strand
Alignment:GTTAATGATTAACTWW
GTTAATNATTAA----
 C A T G A C G T G C A T C G T A C T G A C G A T A C T G C G T A C A G T A G C T C T G A T C G A G A T C G C A T G C T A C G T A
C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A A C G T A C G T A C G T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:4
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:GTTAATGATTAACTWW
-TTAATGTTTAACC--
 C A T G A C G T G C A T C G T A C T G A C G A T A C T G C G T A C A G T A G C T C T G A T C G A G A T C G C A T G C T A C G T A
A C G T A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C A C G T A C G T

PH0051.1_Hoxa4/Jaspar

Match Rank:5
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---GTTAATGATTAACTWW
CNAGTTAATTAATAANN--
 A C G T A C G T A C G T C A T G A C G T G C A T C G T A C T G A C G A T A C T G C G T A C A G T A G C T C T G A T C G A G A T C G C A T G C T A C G T A
T G A C T C G A G T C A T C A G G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G C T C T G A C T G A G A C T G A T C A C G T A C G T

PH0059.1_Hoxb4/Jaspar

Match Rank:6
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---GTTAATGATTAACTWW
CGCGTTAATTAATTACC--
 A C G T A C G T A C G T C A T G A C G T G C A T C G T A C T G A C G A T A C T G C G T A C A G T A G C T C T G A T C G A G A T C G C A T G C T A C G T A
T A G C C T A G G T A C C T A G G A C T G A C T G T C A C G T A C G A T A C G T C T G A C T G A A G C T G C A T T G C A G T A C A G T C A C G T A C G T

PH0070.1_Hoxc5/Jaspar

Match Rank:7
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---GTTAATGATTAACTWW
CGAATTAATTAATTACT--
 A C G T A C G T A C G T C A T G A C G T G C A T C G T A C T G A C G A T A C T G C G T A C A G T A G C T C T G A T C G A G A T C G C A T G C T A C G T A
T A G C T A C G G T C A T C G A A G C T G A C T G T C A C G T A G C A T C A G T C T G A T C G A A G C T G C A T T G C A G A C T G C A T A C G T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:8
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:GTTAATGATTAACTWW
---AATTATT------
 C A T G A C G T G C A T C G T A C T G A C G A T A C T G C G T A C A G T A G C T C T G A T C G A G A T C G C A T G C T A C G T A
A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PH0018.1_Dbx1/Jaspar

Match Rank:9
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GTTAATGATTAACTWW
TAATTAATTAATAATTA-
 A C G T A C G T C A T G A C G T G C A T C G T A C T G A C G A T A C T G C G T A C A G T A G C T C T G A T C G A G A T C G C A T G C T A C G T A
G A C T G C T A C T G A G C A T G C A T G C T A C G T A G C A T G C A T C G T A G C T A G C A T C G T A T C G A C G A T C G A T C T G A A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:10
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GTTAATGATTAACTWW
GKTAATGR--------
 C A T G A C G T G C A T C G T A C T G A C G A T A C T G C G T A C A G T A G C T C T G A T C G A G A T C G C A T G C T A C G T A
A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T