Information for 13-TAAATCATGG (Motif 15)

A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C G T A C T G C G T A A C G T A C G T A C G T C G T A
p-value:1e-5
log p-value:-1.319e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.8 +/- 12.3bp
Average Position of motif in Background62.2 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxc9/MA0485.1/Jaspar

Match Rank:1
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----TAAATCATGG
GGCCATAAATCAC--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C T G A C T G
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:2
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----TAAATCATGG
GGCCATAAATCA---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C T G A C T G
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T A C G T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:3
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----TAAATCATGG
GCCATAAATCA---
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C T G A C T G
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TAAATCATGG--
NNCTNAATTATGANN
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C T G A C T G A C G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:5
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----TAAATCATGG
GGCCATAAATCA---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C T G A C T G
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:6
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----TAAATCATGG--
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C T G A C T G A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TAAATCATGG
CAAATCACTG
 A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C T G A C T G
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TAAATCATGG
TCATCAATCA---
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C T G A C T G
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:9
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TAAATCATGG
NGYCATAAAWCH---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C T G A C T G
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T A C G T

FOS/MA0476.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TAAATCATGG
TGTGACTCATT-
 A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C T G A C T G
C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T A C G T