Information for 11-CTCTCHTSCC (Motif 13)

A G T C A C G T G T A C C G A T A T G C G C A T A C G T A T G C A G T C G T A C
Reverse Opposite:
A C T G A C T G A T C G C G T A C G T A A T C G C G T A C A T G C G T A A C T G
p-value:1e-6
log p-value:-1.500e+01
Information Content per bp:1.782
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif170.4
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets58.1 +/- 29.1bp
Average Position of motif in Background49.0 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0124.1_Gabpa_2/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTCTCHTSCC------
CCGTCTTCCCCCTCAC
 A G T C A C G T G T A C C G A T A T G C G C A T A C G T A T G C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTCTCHTSCC
CNGTCCTCCC
 A G T C A C G T G T A C C G A T A T G C G C A T A C G T A T G C A G T C G T A C
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTCTCHTSCC--
-NNACTTGCCTT
 A G T C A C G T G T A C C G A T A T G C G C A T A C G T A T G C A G T C G T A C A C G T A C G T
A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTCTCHTSCC
CCTCACCTG--
 A C G T A G T C A C G T G T A C C G A T A T G C G C A T A C G T A T G C A G T C G T A C
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTCTCHTSCC
TKCTGTTCCA
 A G T C A C G T G T A C C G A T A T G C G C A T A C G T A T G C A G T C G T A C
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CTCTCHTSCC
NNACTTACCTN--
 A C G T A C G T A C G T A G T C A C G T G T A C C G A T A T G C G C A T A C G T A T G C A G T C G T A C
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CTCTCHTSCC----
-----ATGCCCACC
 A G T C A C G T G T A C C G A T A T G C G C A T A C G T A T G C A G T C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

MZF1/MA0056.1/Jaspar

Match Rank:8
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CTCTCHTSCC--
------TCCCCA
 A G T C A C G T G T A C C G A T A T G C G C A T A C G T A T G C A G T C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

TEAD3/MA0808.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTCTCHTSCC-
---ACATTCCA
 A G T C A C G T G T A C C G A T A T G C G C A T A C G T A T G C A G T C G T A C A C G T
A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CTCTCHTSCC
GTTTCACTTCCG
 A C G T A C G T A G T C A C G T G T A C C G A T A T G C G C A T A C G T A T G C A G T C G T A C
A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G