Information for 8-CGCTGGGCTT (Motif 10)

A G T C T C A G G T A C A C G T A C T G A C T G A T C G A G T C A C G T C G A T
Reverse Opposite:
G C T A C G T A A C T G A T G C A G T C G T A C G T C A A C T G A G T C C T A G
p-value:1e-8
log p-value:-1.847e+01
Information Content per bp:1.848
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif60.1
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets48.8 +/- 29.2bp
Average Position of motif in Background49.8 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CGCTGGGCTT
WDNCTGGGCA-
 A C G T A G T C T C A G G T A C A C G T A C T G A C T G A T C G A G T C A C G T C G A T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

POL001.1_MTE/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CGCTGGGCTT----
NCGACCGCTCCGCTCGAAA
 A C G T A C G T A C G T A C G T A C G T A G T C T C A G G T A C A C G T A C T G A C T G A T C G A G T C A C G T C G A T A C G T A C G T A C G T A C G T
T C A G A T G C C T A G C G T A A T G C A G T C A C T G G A C T A C G T A T G C A T G C A C T G A G T C A C G T A G T C A C T G C T G A C T G A T C G A

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CGCTGGGCTT
TCACCTCTGGGCAG
 A C G T A C G T A C G T A C G T A G T C T C A G G T A C A C G T A C T G A C T G A T C G A G T C A C G T C G A T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGCTGGGCTT------
-GCTGACCTTGAACTN
 A G T C T C A G G T A C A C G T A C T G A C T G A T C G A G T C A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGCTGGGCTT-
TGCTGTGATTT
 A G T C T C A G G T A C A C G T A C T G A C T G A T C G A G T C A C G T C G A T A C G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CGCTGGGCTT
-----NGCTN
 A G T C T C A G G T A C A C G T A C T G A C T G A T C G A G T C A C G T C G A T
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGCTGGGCTT-
-GCAGTGATTT
 A G T C T C A G G T A C A C G T A C T G A C T G A T C G A G T C A C G T C G A T A C G T
A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CGCTGGGCTT-
---NGGGATTA
 A G T C T C A G G T A C A C G T A C T G A C T G A T C G A G T C A C G T C G A T A C G T
A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGCTGGGCTT
-NGTGGGCAT
 A G T C T C A G G T A C A C G T A C T G A C T G A T C G A G T C A C G T C G A T
A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CGCTGGGCTT--
--CTGACCTTTG
 A G T C T C A G G T A C A C G T A C T G A C T G A T C G A G T C A C G T C G A T A C G T A C G T
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G