Information for 1-CTRWGTAAACAKR (Motif 1)

T G A C C G A T C T A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C A T G T C G A
Reverse Opposite:
A G C T G T A C A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A A G T C G C T A A C T G
p-value:1e-155
log p-value:-3.591e+02
Information Content per bp:1.668
Number of Target Sequences with motif222.0
Percentage of Target Sequences with motif28.03%
Number of Background Sequences with motif1233.3
Percentage of Background Sequences with motif2.60%
Average Position of motif in Targets53.3 +/- 21.5bp
Average Position of motif in Background48.8 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:1
Score:0.98
Offset:-1
Orientation:reverse strand
Alignment:-CTRWGTAAACAKR-
NCWRWGTAAACANSV
 A C G T T G A C C G A T C T A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C A T G T C G A A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

Foxa2/MA0047.2/Jaspar

Match Rank:2
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-CTRWGTAAACAKR
NCTAAGTAAACA--
 A C G T T G A C C G A T C T A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C A T G T C G A
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:3
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:CTRWGTAAACAKR
-TATGTAAACANG
 T G A C C G A T C T A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C A T G T C G A
A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

FOXA1/MA0148.3/Jaspar

Match Rank:4
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:CTRWGTAAACAKR--
CAAAGTAAACANNNN
 T G A C C G A T C T A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C A T G T C G A A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.95
Offset:1
Orientation:forward strand
Alignment:CTRWGTAAACAKR
-AAAGTAAACA--
 T G A C C G A T C T A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C A T G T C G A
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:6
Score:0.95
Offset:1
Orientation:forward strand
Alignment:CTRWGTAAACAKR
-AAAGTAAACA--
 T G A C C G A T C T A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C A T G T C G A
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:CTRWGTAAACAKR
-WAAGTAAAYA--
 T G A C C G A T C T A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C A T G T C G A
A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:8
Score:0.92
Offset:1
Orientation:forward strand
Alignment:CTRWGTAAACAKR
-TATGTAAATAT-
 T G A C C G A T C T A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C A T G T C G A
A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.92
Offset:-4
Orientation:forward strand
Alignment:----CTRWGTAAACAKR
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T T G A C C G A T C T A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C A T G T C G A
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

FOXB1/MA0845.1/Jaspar

Match Rank:10
Score:0.92
Offset:1
Orientation:forward strand
Alignment:CTRWGTAAACAKR
-TATGTAAATAT-
 T G A C C G A T C T A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C A T G T C G A
A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T