Information for 4-CAGCGTGTTACAGTGT (Motif 9)

A G T C G T C A T A C G A G T C T C A G C A G T A C T G A G C T A C G T C G T A G T A C C G T A A C T G A G C T C T A G A C G T
Reverse Opposite:
G T C A A G T C C T G A G T A C C G A T C A T G G A C T C G T A C T G A A G T C G C T A A G T C C T A G A G T C A C G T C T A G
p-value:1e-5
log p-value:-1.284e+01
Information Content per bp:1.687
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif23.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets49.3 +/- 30.5bp
Average Position of motif in Background56.1 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:1
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CAGCGTGTTACAGTGT---
----YDGHTACAWTGTADC
 A G T C G T C A T A C G A G T C T C A G C A G T A C T G A G C T A C G T C G T A G T A C C G T A A C T G A G C T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:2
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CAGCGTGTTACAGTGT---
----TWGHWACAWTGTWDC
 A G T C G T C A T A C G A G T C T C A G C A G T A C T G A G C T A C G T C G T A G T A C C G T A A C T G A G C T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

DMRT3/MA0610.1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CAGCGTGTTACAGTGT
---NTTGATACATT--
 A G T C G T C A T A C G A G T C T C A G C A G T A C T G A G C T A C G T C G T A G T A C C G T A A C T G A G C T C T A G A C G T
A C G T A C G T A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CAGCGTGTTACAGTGT
RTTKCADNNKRTTGCATNAN
 A C G T A C G T A C G T A C G T A G T C G T C A T A C G A G T C T C A G C A G T A C T G A G C T A C G T C G T A G T A C C G T A A C T G A G C T C T A G A C G T
T C G A C G A T A C G T C A T G T A G C G C T A C A G T A G C T T G A C C A G T T C G A A G C T A C G T C A T G G T A C G T C A G C A T G C T A C G T A A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CAGCGTGTTACAGTGT
----CTGTTGCTAGGS
 A G T C G T C A T A C G A G T C T C A G C A G T A C T G A G C T A C G T C G T A G T A C C G T A A C T G A G C T C T A G A C G T
A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

PH0158.1_Rhox11_2/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CAGCGTGTTACAGTGT---
--TCNCTTTACAGCGNNNT
 A G T C G T C A T A C G A G T C T C A G C A G T A C T G A G C T A C G T C G T A G T A C C G T A A C T G A G C T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Rhox11/MA0629.1/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CAGCGTGTTACAGTGT---
--TCNNTTTACAGCGNNNT
 A G T C G T C A T A C G A G T C T C A G C A G T A C T G A G C T A C G T C G T A G T A C C G T A A C T G A G C T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CAGCGTGTTACAGTGT---
--TCNNTTTACAGCGNNNT
 A G T C G T C A T A C G A G T C T C A G C A G T A C T G A G C T A C G T C G T A G T A C C G T A A C T G A G C T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CAGCGTGTTACAGTGT
-AAGGTGTKAA-----
 A G T C G T C A T A C G A G T C T C A G C A G T A C T G A G C T A C G T C G T A G T A C C G T A A C T G A G C T C T A G A C G T
A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CAGCGTGTTACAGTGT
CCACCTGTTGCAT---
 A G T C G T C A T A C G A G T C T C A G C A G T A C T G A G C T A C G T C G T A G T A C C G T A A C T G A G C T C T A G A C G T
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T A C G T A C G T A C G T