Information for 3-AGAWAYTWAARGC (Motif 4)

C G T A A C T G C G T A C G A T C G T A A G T C A C G T C G A T C G T A C G T A C T G A A C T G A G T C
Reverse Opposite:
A C T G A G T C A G C T A C G T A C G T C G T A C G T A C T A G A C G T G C T A A C G T G T A C A C G T
p-value:1e-11
log p-value:-2.543e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.2 +/- 30.0bp
Average Position of motif in Background15.9 +/- 8.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGAWAYTWAARGC
-GAAAGTGAAAGT
 C G T A A C T G C G T A C G A T C G T A A G T C A C G T C G A T C G T A C G T A C T G A A C T G A G T C
A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGAWAYTWAARGC
-GAAASYGAAASY
 C G T A A C T G C G T A C G A T C G T A A G T C A C G T C G A T C G T A C G T A C T G A A C T G A G T C
A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

IRF1/MA0050.2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AGAWAYTWAARGC----
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G A T C G T A A G T C A C G T C G A T C G T A C G T A C T G A A C T G A G T C A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGAWAYTWAARGC
-GAAACTGAAACT
 C G T A A C T G C G T A C G A T C G T A A G T C A C G T C G A T C G T A C G T A C T G A A C T G A G T C
A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGAWAYTWAARGC
AGAAACGAAAGT-
 C G T A A C T G C G T A C G A T C G T A A G T C A C G T C G A T C G T A C G T A C T G A A C T G A G T C
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGAWAYTWAARGC
-GWAAYHTGAKMC
 C G T A A C T G C G T A C G A T C G T A A G T C A C G T C G A T C G T A C G T A C T G A A C T G A G T C
A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

PRDM1/MA0508.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGAWAYTWAARGC--
AGAAAGTGAAAGTGA
 C G T A A C T G C G T A C G A T C G T A A G T C A C G T C G A T C G T A C G T A C T G A A C T G A G T C A C G T A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

IRF2/MA0051.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGAWAYTWAARGC-----
GGAAAGCGAAACCAAAAC
 C G T A A C T G C G T A C G A T C G T A A G T C A C G T C G A T C G T A C G T A C T G A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGAWAYTWAARGC
-GAAAMTGAAACT
 C G T A A C T G C G T A C G A T C G T A A G T C A C G T C G A T C G T A C G T A C T G A A C T G A G T C
A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGAWAYTWAARGC
-GRAASTGAAAST
 C G T A A C T G C G T A C G A T C G T A A G T C A C G T C G A T C G T A C G T A C T G A A C T G A G T C
A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T