Information for 5-ACTCAGGCACACAGGA (Motif 14)

C G T A A T G C A C G T A G T C C G T A A C T G A C T G A T G C C G T A G T A C C T G A A G T C C G T A A C T G A C T G C T G A
Reverse Opposite:
A G C T A G T C G T A C A C G T A C T G A G C T A C T G A C G T A T C G A G T C A G T C C G A T A C T G G T C A A T C G C G A T
p-value:1e-8
log p-value:-2.054e+01
Information Content per bp:1.908
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.3 +/- 22.5bp
Average Position of motif in Background47.2 +/- 40.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ACTCAGGCACACAGGA--
--CGAAGCACACAAAATA
 C G T A A T G C A C G T A G T C C G T A A C T G A C T G A T G C C G T A G T A C C T G A A G T C C G T A A C T G A C T G C T G A A C G T A C G T
A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ACTCAGGCACACAGGA--
--AGCGGCACACACGCAA
 C G T A A T G C A C G T A G T C C G T A A C T G A C T G A T G C C G T A G T A C C T G A A G T C C G T A A C T G A C T G C T G A A C G T A C G T
A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ACTCAGGCACACAGGA-
--SCAGYCADGCATGAC
 C G T A A T G C A C G T A G T C C G T A A C T G A C T G A T G C C G T A G T A C C T G A A G T C C G T A A C T G A C T G C T G A A C G T
A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ACTCAGGCACACAGGA
--CCAGGAACAG----
 C G T A A T G C A C G T A G T C C G T A A C T G A C T G A T G C C G T A G T A C C T G A A G T C C G T A A C T G A C T G C T G A
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.54
Offset:9
Orientation:forward strand
Alignment:ACTCAGGCACACAGGA---
---------AACAGGAAGT
 C G T A A T G C A C G T A G T C C G T A A C T G A C T G A T G C C G T A G T A C C T G A A G T C C G T A A C T G A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:ACTCAGGCACACAGGA
---------CACAGN-
 C G T A A T G C A C G T A G T C C G T A A C T G A C T G A T G C C G T A G T A C C T G A A G T C C G T A A C T G A C T G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:ACTCAGGCACACAGGA
-----GGAACAAAGR-
 C G T A A T G C A C G T A G T C C G T A A C T G A C T G A T G C C G T A G T A C C T G A A G T C C G T A A C T G A C T G C T G A
A C G T A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:8
Score:0.51
Offset:4
Orientation:forward strand
Alignment:ACTCAGGCACACAGGA
----AGCCACTCAAG-
 C G T A A T G C A C G T A G T C C G T A A C T G A C T G A T G C C G T A G T A C C T G A A G T C C G T A A C T G A C T G C T G A
A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.51
Offset:9
Orientation:forward strand
Alignment:ACTCAGGCACACAGGA---
---------NACAGGAAAT
 C G T A A T G C A C G T A G T C C G T A A C T G A C T G A T G C C G T A G T A C C T G A A G T C C G T A A C T G A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:10
Score:0.51
Offset:10
Orientation:forward strand
Alignment:ACTCAGGCACACAGGA----
----------ACAGGAAGTG
 C G T A A T G C A C G T A G T C C G T A A C T G A C T G A T G C C G T A G T A C C T G A A G T C C G T A A C T G A C T G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G