Information for 6-CHGTTTGTRG (Motif 6)

G T A C G A T C C T A G G A C T C A G T C G A T C T A G A C G T C T A G T A C G
Reverse Opposite:
A T G C G A T C T G C A G A T C C G T A G T C A C T G A G A T C C T A G C A T G
p-value:1e-10
log p-value:-2.380e+01
Information Content per bp:1.668
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.64%
Number of Background Sequences with motif617.7
Percentage of Background Sequences with motif1.28%
Average Position of motif in Targets58.0 +/- 26.5bp
Average Position of motif in Background47.4 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0008.1_MADS_class/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CHGTTTGTRG
CCATATATGG
 G T A C G A T C C T A G G A C T C A G T C G A T C T A G A C G T C T A G T A C G
G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G

MEF2D/MA0773.1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CHGTTTGTRG-
TCTATTTATAGN
 A C G T G T A C G A T C C T A G G A C T C A G T C G A T C T A G A C G T C T A G T A C G A C G T
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CHGTTTGTRG-
GCTATTTTTGGM
 A C G T G T A C G A T C C T A G G A C T C A G T C G A T C T A G A C G T C T A G T A C G A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

MEF2B/MA0660.1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CHGTTTGTRG-
GCTATTTATAGC
 A C G T G T A C G A T C C T A G G A C T C A G T C G A T C T A G A C G T C T A G T A C G A C G T
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CHGTTTGTRG----
--NNHTGTGGTTWN
 G T A C G A T C C T A G G A C T C A G T C G A T C T A G A C G T C T A G T A C G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CHGTTTGTRG
CTATTTTTGG
 G T A C G A T C C T A G G A C T C A G T C G A T C T A G A C G T C T A G T A C G
A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

MEF2A/MA0052.3/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CHGTTTGTRG-
TCTATTTTTAGA
 A C G T G T A C G A T C C T A G G A C T C A G T C G A T C T A G A C G T C T A G T A C G A C G T
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CHGTTTGTRG-
KCTATTTTTRGH
 A C G T G T A C G A T C C T A G G A C T C A G T C G A T C T A G A C G T C T A G T A C G A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CHGTTTGTRG---
TTCTATTTTTAGNNN
 A C G T A C G T G T A C G A T C C T A G G A C T C A G T C G A T C T A G A C G T C T A G T A C G A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CHGTTTGTRG---
--GTCTGTGGTTT
 G T A C G A T C C T A G G A C T C A G T C G A T C T A G A C G T C T A G T A C G A C G T A C G T A C G T
A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T