Information for 4-CTCATAATGA (Motif 8)

A G T C A C G T A T G C C G T A A C G T C G T A C G T A C G A T C T A G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C G T C G A T G T C A A C G T A T C G C G T A C T A G
p-value:1e-9
log p-value:-2.271e+01
Information Content per bp:1.880
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif40.4
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets58.8 +/- 20.6bp
Average Position of motif in Background43.8 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0152.1_Pou6f1_2/Jaspar

Match Rank:1
Score:0.78
Offset:-5
Orientation:reverse strand
Alignment:-----CTCATAATGA--
GCAACCTCATTATNNNN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A T G C C G T A A C G T C G T A C G T A C G A T C T A G C G T A A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

POU6F2/MA0793.1/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CTCATAATGA
AGCTCATTAT--
 A C G T A C G T A G T C A C G T A T G C C G T A A C G T C G T A C G T A C G A T C T A G C G T A
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:3
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----CTCATAATGA--
NNNACCTCATTATCNTN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A T G C C G T A A C G T C G T A C G T A C G A T C T A G C G T A A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CTCATAATGA---
BAGTCATANTGAAAG
 A C G T A C G T A G T C A C G T A T G C C G T A A C G T C G T A C G T A C G A T C T A G C G T A A C G T A C G T A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CTCATAATGA-----
WNAGTCADAVTGAAACTN
 A C G T A C G T A C G T A G T C A C G T A T G C C G T A A C G T C G T A C G T A C G A T C T A G C G T A A C G T A C G T A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

PB0176.1_Sox5_2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTCATAATGA----
TATCATAATTAAGGA
 A C G T A G T C A C G T A T G C C G T A A C G T C G T A C G T A C G A T C T A G C G T A A C G T A C G T A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTCATAATGA
NCTAATTA---
 A C G T A G T C A C G T A T G C C G T A A C G T C G T A C G T A C G A T C T A G C G T A
T A C G A G T C A G C T G T C A C G T A A C G T A C G T C T G A A C G T A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTCATAATGA
--GKTAATGR
 A G T C A C G T A T G C C G T A A C G T C G T A C G T A C G A T C T A G C G T A
A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A

NKX6-2/MA0675.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTCATAATGA
CTAATTAA--
 A G T C A C G T A T G C C G T A A C G T C G T A C G T A C G A T C T A G C G T A
A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A A C G T A C G T

MEOX2/MA0706.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTCATAATGA--
--NTTAATTACN
 A G T C A C G T A T G C C G T A A C G T C G T A C G T A C G A T C T A G C G T A A C G T A C G T
A C G T A C G T A C T G G C A T G A C T T C G A G T C A C A G T A C G T C T G A A T G C G A C T