Information for 10-AAAKAAAACA (Motif 13)

C G T A G T C A C G T A C A G T G C T A G T C A G C T A G C T A G A T C T C G A
Reverse Opposite:
A G C T C T A G C G A T C G A T A C G T C G A T G T C A C G A T C A G T G C A T
p-value:1e-7
log p-value:-1.729e+01
Information Content per bp:1.606
Number of Target Sequences with motif119.0
Percentage of Target Sequences with motif14.88%
Number of Background Sequences with motif4311.6
Percentage of Background Sequences with motif8.91%
Average Position of motif in Targets51.1 +/- 28.8bp
Average Position of motif in Background50.2 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AAAKAAAACA
AAAGTAAACA
 C G T A G T C A C G T A C A G T G C T A G T C A G C T A G C T A G A T C T C G A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AAAKAAAACA
AAAGTAAACA
 C G T A G T C A C G T A C A G T G C T A G T C A G C T A G C T A G A T C T C G A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AAAKAAAACA---
-AAACAAACATTC
 C G T A G T C A C G T A C A G T G C T A G T C A G C T A G C T A G A T C T C G A A C G T A C G T A C G T
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AAAKAAAACA
WAAGTAAAYA
 C G T A G T C A C G T A C A G T G C T A G T C A G C T A G C T A G A T C T C G A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

FOXP1/MA0481.1/Jaspar

Match Rank:5
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AAAKAAAACA---
CAAAAGTAAACAAAG
 A C G T A C G T C G T A G T C A C G T A C A G T G C T A G T C A G C T A G C T A G A T C T C G A A C G T A C G T A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

FOXC2/MA0846.1/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AAAKAAAACA--
TAAGTAAACAAA
 C G T A G T C A C G T A C A G T G C T A G T C A G C T A G C T A G A T C T C G A A C G T A C G T
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AAAKAAAACA
-AAATAAACA
 C G T A G T C A C G T A C A G T G C T A G T C A G C T A G C T A G A T C T C G A
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

FOXA1/MA0148.3/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AAAKAAAACA----
CAAAGTAAACANNNN
 A C G T C G T A G T C A C G T A C A G T G C T A G T C A G C T A G C T A G A T C T C G A A C G T A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

PB0182.1_Srf_2/Jaspar

Match Rank:9
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AAAKAAAACA---
GTTAAAAAAAAAAATTA
 A C G T A C G T A C G T A C G T C G T A G T C A C G T A C A G T G C T A G T C A G C T A G C T A G A T C T C G A A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0093.1_Zfp105_1/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AAAKAAAACA----
AACAAACAACAAGAG
 A C G T C G T A G T C A C G T A C A G T G C T A G T C A G C T A G C T A G A T C T C G A A C G T A C G T A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G