Information for 6-GCGTCTGTGC (Motif 10)

C T A G G T A C C A T G A C G T A T G C A C G T A C T G A C G T A T C G G T A C
Reverse Opposite:
A C T G A T G C G T C A T G A C C G T A A T C G G T C A G T A C A C T G A G T C
p-value:1e-9
log p-value:-2.228e+01
Information Content per bp:1.838
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.88%
Number of Background Sequences with motif98.0
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets53.3 +/- 22.0bp
Average Position of motif in Background47.1 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--GCGTCTGTGC----
NNGCGTGTGTGCNGCN
 A C G T A C G T C T A G G T A C C A T G A C G T A T G C A C G T A C T G A C G T A T C G G T A C A C G T A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GCGTCTGTGC
VBSYGTCTGG--
 A C G T A C G T C T A G G T A C C A T G A C G T A T G C A C G T A C T G A C G T A T C G G T A C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GCGTCTGTGC--
GGNGCGNCTGTTNNN
 A C G T A C G T A C G T C T A G G T A C C A T G A C G T A T G C A C G T A C T G A C G T A T C G G T A C A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

NRF1/MA0506.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCGTCTGTGC-
GCGCCTGCGCA
 C T A G G T A C C A T G A C G T A T G C A C G T A C T G A C G T A T C G G T A C A C G T
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCGTCTGTGC----
NNNNTTGTGTGCTTNN
 A C G T A C G T C T A G G T A C C A T G A C G T A T G C A C G T A C T G A C G T A T C G G T A C A C G T A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCGTCTGTGC
CTGTCTGG--
 C T A G G T A C C A T G A C G T A T G C A C G T A C T G A C G T A T C G G T A C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCGTCTGTGC
---GCTGTG-
 C T A G G T A C C A T G A C G T A T G C A C G T A C T G A C G T A T C G G T A C
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCGTCTGTGC-------
NNGTATGTGCACATNNN
 C T A G G T A C C A T G A C G T A T G C A C G T A C T G A C G T A T C G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GCGTCTGTGC----
----CTGTTCCTGG
 C T A G G T A C C A T G A C G T A T G C A C G T A C T G A C G T A T C G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCGTCTGTGC-
-WDNCTGGGCA
 C T A G G T A C C A T G A C G T A T G C A C G T A C T G A C G T A T C G G T A C A C G T
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A