Information for 13-GTAATCCCCT (Motif 18)

A C T G A C G T C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C T G A C T G C G T A A C G T A C G T C G T A A G T C
p-value:1e-3
log p-value:-7.470e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.2 +/- 23.2bp
Average Position of motif in Background48.5 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GTAATCCCCT-
CTAATCCTCTT
 A C T G A C G T C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C G T A C G T
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

PH0121.1_Obox1/Jaspar

Match Rank:2
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----GTAATCCCCT---
NTAGTTAATCCCCTTAN
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.78
Offset:1
Orientation:forward strand
Alignment:GTAATCCCCT
-TAATCCCN-
 A C T G A C G T C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C G T
A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T

PH0015.1_Crx/Jaspar

Match Rank:4
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---GTAATCCCCT---
AGGCTAATCCCCAANG
 A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

PITX3/MA0714.1/Jaspar

Match Rank:5
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GTAATCCCCT
CTTAATCCC--
 A C G T A C T G A C G T C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C G T
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:6
Score:0.76
Offset:-5
Orientation:reverse strand
Alignment:-----GTAATCCCCT-
GNNAGCTAATCCCCCN
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

GSC/MA0648.1/Jaspar

Match Rank:7
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GTAATCCCCT
GCTAATCCCC-
 A C G T A C T G A C G T C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C G T
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C A C G T

PH0129.1_Otx1/Jaspar

Match Rank:8
Score:0.76
Offset:-5
Orientation:reverse strand
Alignment:-----GTAATCCCCT--
NNNAATTAATCCCCNCN
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C G T A C G T A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

Pitx1/MA0682.1/Jaspar

Match Rank:9
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GTAATCCCCT
TTAATCCC--
 A C T G A C G T C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C G T
G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:10
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GTAATCCCCT
CCTAATCCGC-
 A C G T A C T G A C G T C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C G T
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T