Information for 1-AAAACCACAC (Motif 3)

T C G A G T C A G C T A G T C A T A G C G T A C G T C A T G A C T C G A T A G C
Reverse Opposite:
A T C G A G C T A C T G C A G T A C T G A T C G C A G T C G A T C A G T A G C T
p-value:1e-12
log p-value:-2.986e+01
Information Content per bp:1.656
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif6.50%
Number of Background Sequences with motif988.9
Percentage of Background Sequences with motif2.07%
Average Position of motif in Targets56.8 +/- 28.1bp
Average Position of motif in Background47.5 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.87
Offset:1
Orientation:forward strand
Alignment:AAAACCACAC-
-AAACCACANN
 T C G A G T C A G C T A G T C A T A G C G T A C G T C A T G A C T C G A T A G C A C G T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:AAAACCACAC--
-AAACCACAGAN
 T C G A G T C A G C T A G T C A T A G C G T A C G T C A T G A C T C G A T A G C A C G T A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.84
Offset:0
Orientation:forward strand
Alignment:AAAACCACAC
NAAACCACAG
 T C G A G T C A G C T A G T C A T A G C G T A C G T C A T G A C T C G A T A G C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.84
Offset:0
Orientation:forward strand
Alignment:AAAACCACAC--
NWAACCACADNN
 T C G A G T C A G C T A G T C A T A G C G T A C G T C A T G A C T C G A T A G C A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:AAAACCACAC-
-AAACCACAGC
 T C G A G T C A G C T A G T C A T A G C G T A C G T C A T G A C T C G A T A G C A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.77
Offset:1
Orientation:forward strand
Alignment:AAAACCACAC-
-AAACCGCAAA
 T C G A G T C A G C T A G T C A T A G C G T A C G T C A T G A C T C G A T A G C A C G T
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.76
Offset:1
Orientation:forward strand
Alignment:AAAACCACAC
-AAACCGCAA
 T C G A G T C A G C T A G T C A T A G C G T A C G T C A T G A C T C G A T A G C
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AAAACCACAC
TCCAATCCACA-
 A C G T A C G T T C G A G T C A G C T A G T C A T A G C G T A C G T C A T G A C T C G A T A G C
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AAAACCACAC-
SSAATCCACANN
 A C G T T C G A G T C A G C T A G T C A T A G C G T A C G T C A T G A C T C G A T A G C A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AAAACCACAC
--ATCCAC--
 T C G A G T C A G C T A G T C A T A G C G T A C G T C A T G A C T C G A T A G C
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T