Information for 18-CATCGGGGCTTTT (Motif 29)

A G T C C T G A A G C T A G T C A C T G A T C G A C T G A C T G A G T C A C G T A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A C G T A A C T G A G T C A G T C T A G C A G T C A C T G C T G A A G C T A C T G
p-value:1e-3
log p-value:-8.702e+00
Information Content per bp:1.937
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.23%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.0 +/- 15.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CATCGGGGCTTTT-
----GGGGATTTCC
 A G T C C T G A A G C T A G T C A C T G A T C G A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CATCGGGGCTTTT-
----GGGGATTTCC
 A G T C C T G A A G C T A G T C A C T G A T C G A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CATCGGGGCTTTT---
-GGNGCGNCTGTTNNN
 A G T C C T G A A G C T A G T C A C T G A T C G A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:4
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CATCGGGGCTTTT
-NRRGGGTCTT--
 A G T C C T G A A G C T A G T C A C T G A T C G A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CATCGGGGCTTTT----
CAKCTGKYCYYTTYCCC
 A G T C C T G A A G C T A G T C A C T G A T C G A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C G C T A A C G T T G A C C G A T A C T G A C T G A G T C A G T C A G T C A G C T A G C T A G C T A G C T G A T C T G A C G T A C

PB0143.1_Klf7_2/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CATCGGGGCTTTT----
NNNTNGGGCGTATNNTN
 A G T C C T G A A G C T A G T C A C T G A T C G A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CATCGGGGCTTTT--
---NGGGGATTTCCC
 A G T C C T G A A G C T A G T C A C T G A T C G A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.50
Offset:-6
Orientation:reverse strand
Alignment:------CATCGGGGCTTTT
CCNNACCATCTGGCCTN--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A A G C T A G T C A C T G A T C G A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T A C G T A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:9
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CATCGGGGCTTTT
GTACATCCGGATTTTT
 A C G T A C G T A C G T A G T C C T G A A G C T A G T C A C T G A T C G A C T G A C T G A G T C A C G T A C G T A C G T A C G T
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

PB0201.1_Zfp281_2/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CATCGGGGCTTTT--
NNNATTGGGGGTNTCCT
 A C G T A C G T A G T C C T G A A G C T A G T C A C T G A T C G A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T