Information for 10-GAATGGCTTG (Motif 23)

C T A G C G T A T C G A C G A T A C T G C T A G A G T C A C G T A C G T A C T G
Reverse Opposite:
G T A C G T C A G T C A A C T G A G T C A G T C G C T A A G C T A C G T A G T C
p-value:1e-7
log p-value:-1.823e+01
Information Content per bp:1.852
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif43.8
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets59.5 +/- 28.0bp
Average Position of motif in Background52.4 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GAATGGCTTG-
TGATTGGCTANN
 A C G T C T A G C G T A T C G A C G A T A C T G C T A G A G T C A C G T A C G T A C T G A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAATGGCTTG---
AGAAATGACTTCCCT
 A C G T A C G T C T A G C G T A T C G A C G A T A C T G C T A G A G T C A C G T A C G T A C T G A C G T A C G T A C G T
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GAATGGCTTG--
--ATGGGGTGAT
 C T A G C G T A T C G A C G A T A C T G C T A G A G T C A C G T A C G T A C T G A C G T A C G T
A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAATGGCTTG
GTTAATGGCC--
 A C G T A C G T C T A G C G T A T C G A C G A T A C T G C T A G A G T C A C G T A C G T A C T G
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAATGGCTTG
CCGATTGGCT--
 A C G T A C G T C T A G C G T A T C G A C G A T A C T G C T A G A G T C A C G T A C G T A C T G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAATGGCTTG-----
CAAAGGCGTGGCCAG
 C T A G C G T A T C G A C G A T A C T G C T A G A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

SREBF2/MA0596.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GAATGGCTTG--
--ATGGGGTGAT
 C T A G C G T A T C G A C G A T A C T G C T A G A G T C A C G T A C G T A C T G A C G T A C G T
A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GAATGGCTTG----
--GTGGCGTGACNG
 C T A G C G T A T C G A C G A T A C T G C T A G A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

YY2/MA0748.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAATGGCTTG-
TAATGGCGGNC
 C T A G C G T A T C G A C G A T A C T G C T A G A G T C A C G T A C G T A C T G A C G T
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GAATGGCTTG-----
NAGANTGGCGGGGNGNA
 A C G T A C G T C T A G C G T A T C G A C G A T A C T G C T A G A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A