Information for 2-GHAACCACAA (Motif 2)

C A T G G C A T T C G A T C G A T G A C A G T C C T G A G T A C T C G A C G T A
Reverse Opposite:
G C A T A G C T A C T G G A C T A C T G A C T G A G C T A G C T C G T A G T A C
p-value:1e-36
log p-value:-8.292e+01
Information Content per bp:1.645
Number of Target Sequences with motif144.0
Percentage of Target Sequences with motif17.06%
Number of Background Sequences with motif2445.2
Percentage of Background Sequences with motif5.09%
Average Position of motif in Targets50.0 +/- 27.3bp
Average Position of motif in Background50.1 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.95
Offset:0
Orientation:forward strand
Alignment:GHAACCACAA--
NWAACCACADNN
 C A T G G C A T T C G A T C G A T G A C A G T C C T G A G T A C T C G A C G T A A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.95
Offset:1
Orientation:forward strand
Alignment:GHAACCACAA-
-AAACCACANN
 C A T G G C A T T C G A T C G A T G A C A G T C C T G A G T A C T C G A C G T A A C G T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.95
Offset:0
Orientation:forward strand
Alignment:GHAACCACAA
NAAACCACAG
 C A T G G C A T T C G A T C G A T G A C A G T C C T G A G T A C T C G A C G T A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:GHAACCACAA--
-AAACCACAGAN
 C A T G G C A T T C G A T C G A T G A C A G T C C T G A G T A C T C G A C G T A A C G T A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:GHAACCACAA-
-AAACCACAGC
 C A T G G C A T T C G A T C G A T G A C A G T C C T G A G T A C T C G A C G T A A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.87
Offset:1
Orientation:forward strand
Alignment:GHAACCACAA-
-AAACCGCAAA
 C A T G G C A T T C G A T C G A T G A C A G T C C T G A G T A C T C G A C G T A A C G T
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.86
Offset:1
Orientation:forward strand
Alignment:GHAACCACAA
-AAACCGCAA
 C A T G G C A T T C G A T C G A T G A C A G T C C T G A G T A C T C G A C G T A
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.77
Offset:2
Orientation:forward strand
Alignment:GHAACCACAA
--ATCCAC--
 C A T G G C A T T C G A T C G A T G A C A G T C C T G A G T A C T C G A C G T A
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:9
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GHAACCACAA--
GCGACCACACTG
 C A T G G C A T T C G A T C G A T G A C A G T C C T G A G T A C T C G A C G T A A C G T A C G T
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

ZBTB7C/MA0695.1/Jaspar

Match Rank:10
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GHAACCACAA--
GCGACCACCGAA
 C A T G G C A T T C G A T C G A T G A C A G T C C T G A G T A C T C G A C G T A A C G T A C G T
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A